Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 140394120 . C A CCDS3747.1:NM_031296.1:c.530aCg>aAg_NP_112586.1:p.177T>K Homo sapiens RAB33B, member RAS oncogene family (RAB33B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zay 1 Q9H082 99.48 2e-144 X-RAY
 2020-09-30 THR A:151 A:177 0.0 0.0 -143.2 177.0 0.0 0.0 0.0 PO4
GDP
HOH
 7.126
5.056
3.171
 N
O
OG1
 O4
O6
O
THR C:151 B:177 0.0 0.0 -146.7 176.1 0.0 0.0 0.0 PEG
GDP
HOH
 6.924
4.955
3.243
 N
O
OG1
 O4
O6
O
6y09 1 Q9H082 98.95 2e-143 X-RAY
 2020-09-30 THR A:151 A:177 0.0 0.0 -135.5 177.9 0.0 0.0 0.0 GTP
HOH
 5.150
3.043
 O
OG1
 O6
O
THR C:151 B:177 0.0 0.0 -152.8 174.6 0.0 0.0 0.0 GTP
PEG
HOH
 5.164
6.788
3.056
 O
N
OG1
 O6
O4
O
2g77 2 O35963 98.38 1e-137 X-RAY
 2006-07-25 THR B:173 B:177 2.0 0.014 -152.4 -174.6 2.0 0.014 0.0 GDP
HOH
 4.984
4.376
 O
CA
 O6
O
1z06 1 O35963 96.13 8e-130 X-RAY
 2005-07-26 THR A:164 A:177 1.0 0.007 -146.7 -174.2 1.0 0.007 0.0 GNP
HOH
 5.063
5.497
 O
N
 O6
O
6sur 1 O35963 98.27 7e-129 X-RAY
 2020-08-05 THR A:148 A:177 1.0 0.007 -147.3 -176.4 1.0 0.007 0.0 GTP
 5.541
 O
 O6
THR B:148 B:177 1.0 0.007 -148.7 -175.0 1.0 0.007 0.0 GTP
 5.550
 O
 O6
THR C:148 C:177 1.0 0.007 -146.2 -177.1 NA NA NA
THR D:148 D:177 1.0 0.007 -148.8 -175.1 NA NA NA
THR E:148 E:177 2.0 0.014 -147.8 -175.2 NA NA NA
THR F:148 F:177 1.0 0.007 -147.2 -176.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h082-f1 1 Q9H082 100.0 2e-176 THR A:177 A:177 0.0 0.0 E -153.5 171.9