Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 140441439 . G A CCDS3748.1:NM_030648.2:c.754Cac>Tac_NP_085151.1:p.252H>Y Homo sapiens SET domain containing (lysine methyltransferase) 7 (SETD7), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1n6c 1 Q8WTS6 100.0 0.0 X-RAY
 2003-02-04 HIS A:183 A:252 56.0 0.287 H -65.0 -40.4 56.0 0.287 0.0 HOH
 2.981
 CD2
 O
1h3i 1 Q8WTS6 100.0 0.0 X-RAY
 2002-11-11 HIS A:201 A:252 44.0 0.226 H -62.2 -36.9 44.0 0.226 0.0 HOH
 3.480
 N
 O
HIS B:201 B:252 37.0 0.19 H -65.0 -34.5 NA NA NA
1mt6 1 Q8WTS6 100.0 0.0 X-RAY
 2002-11-06 HIS A:195 A:252 51.0 0.262 H -46.0 -46.9 51.0 0.262 0.0 HOH
 2.859
 CD2
 O
1n6a 1 Q8WTS6 100.0 0.0 X-RAY
 2003-02-04 HIS A:145 A:252 55.0 0.282 H -66.5 -30.8 55.0 0.282 0.0 HOH
 3.159
 CD2
 O
1o9s 1 Q8WTS6 100.0 0.0 X-RAY
 2003-02-06 HIS A:145 A:252 43.0 0.221 H -64.6 -29.0 25.0 0.128 0.093 C:Q16776:0.092
 HOH
 3.004
 N
 O
HIS B:145 B:252 45.0 0.231 H -59.4 -38.1 NA NA NA
1xqh 1 Q8WTS6 100.0 0.0 X-RAY
 2004-11-23 HIS A:150 A:252 46.0 0.236 H -59.3 -35.9 37.0 0.19 0.046 B:P04637:0.046
 HOH
 2.787
 ND1
 O
HIS C:150 E:252 45.0 0.231 H -59.1 -34.7 NA NA NA
4e47 1 Q8WTS6 100.0 0.0 X-RAY
 2012-03-28 HIS A:144 A:252 53.0 0.272 H -61.1 -40.8 53.0 0.272 0.0 0N6
HOH
 2.821
3.370
 ND1
N
 N1
O
HIS B:144 B:252 43.0 0.221 H -60.8 -39.9 NA NA NA
HIS C:144 C:252 45.0 0.231 H -62.4 -37.5 NA NA NA
HIS D:144 D:252 54.0 0.277 H -61.5 -37.5 NA NA NA
4jds 1 Q8WTS6 100.0 0.0 X-RAY
 2013-03-27 HIS A:144 A:252 25.0 0.128 H -58.3 -39.6 25.0 0.128 0.0 1L4
UNX
HOH
 2.909
9.294
3.777
 ND1
CE1
CE1
 NAU
UNK
O
HIS B:144 B:252 27.0 0.138 H -55.9 -40.0 NA NA NA
HIS C:144 C:252 19.0 0.097 H -58.1 -41.1 NA NA NA
HIS D:144 D:252 31.0 0.159 H -61.1 -38.6 NA NA NA
4jlg 1 Q8WTS6 100.0 0.0 X-RAY
 2013-04-17 HIS A:144 A:252 28.0 0.144 H -60.6 -34.2 28.0 0.144 0.0 1L8
UNX
UNX
UNX
HOH
 2.955
5.389
7.671
9.604
3.609
 ND1
NE2
NE2
CE1
CE1
 NAV
UNK
UNK
UNK
O
HIS B:144 B:252 26.0 0.133 H -62.5 -37.9 NA NA NA
2f69 1 Q8WTS6 100.0 0.0 X-RAY
 2006-01-17 HIS A:147 A:252 47.0 0.241 H -61.4 -36.0 15.0 0.077 0.164 B:None:0.164
 HOH
 2.878
 ND1
 O
3m53 1 Q8WTS6 100.0 0.0 X-RAY
 2010-07-28 HIS A:147 A:252 46.0 0.236 H -57.6 -36.0 24.0 0.123 0.113 B:None:0.113
 HOH
 2.811
 N
 O
4j83 1 Q8WTS6 100.0 0.0 X-RAY
 2014-01-08 HIS A:147 A:252 49.0 0.251 H -59.2 -35.9 35.0 0.179 0.072 B:Q12962:0.072
 HOH
 2.718
 ND1
 O
4j8o 1 Q8WTS6 100.0 0.0 X-RAY
 2014-01-08 HIS A:147 A:252 48.0 0.246 H -57.9 -38.4 22.0 0.113 0.133 B:Q12962:0.133
 HOH
 2.820
 ND1
 O
5eg2 1 Q8WTS6 99.23 0.0 X-RAY
 2016-01-13 HIS A:148 A:252 39.0 0.2 H -59.3 -34.5 25.0 0.128 0.072 B:Q12962:0.072
 HOH
 2.886
 ND1
 O
3m54 1 Q8WTS6 99.61 0.0 X-RAY
 2010-07-28 HIS A:147 A:252 49.0 0.251 H -58.3 -37.1 23.0 0.118 0.133 B:None:0.133
 HOH
 2.713
 N
 O
3m55 1 Q8WTS6 99.61 0.0 X-RAY
 2010-07-28 HIS A:147 A:252 45.0 0.231 H -63.7 -33.2 23.0 0.118 0.113 B:None:0.113
 HOH
 2.747
 N
 O
3m56 1 Q8WTS6 99.61 0.0 X-RAY
 2010-07-28 HIS A:147 A:252 36.0 0.185 H -58.4 -38.0 7.0 0.036 0.149 B:None:0.149
 HOH
 2.573
 ND1
 O
4j7i 1 Q8WTS6 99.61 0.0 X-RAY
 2014-01-08 HIS A:147 A:252 50.0 0.256 H -55.3 -40.2 36.0 0.185 0.071 B:Q12962:0.072
3vuz 1 Q8WTS6 100.0 0.0 X-RAY
 2013-03-27 HIS A:149 A:252 50.0 0.256 H -58.0 -39.1 50.0 0.256 0.0 HOH
 6.216
 N
 O
3vv0 1 Q8WTS6 100.0 0.0 X-RAY
 2013-03-27 HIS A:149 A:252 52.0 0.267 H -62.1 -34.6 52.0 0.267 0.0 HOH
 3.274
 ND1
 O
5ylt 1 Q8WTS6 100.0 0.0 X-RAY
 2018-06-20 HIS A:149 A:252 47.0 0.241 H -56.2 -34.7 47.0 0.241 0.0 HOH
 2.881
 ND1
 O
3cbm 1 Q8WTS6 100.0 0.0 X-RAY
 2008-05-13 HIS A:142 A:252 48.0 0.246 H -65.4 -34.3 22.0 0.113 0.133 B:None:0.133
 HOH
 2.800
 ND1
 O
3cbo 1 Q8WTS6 100.0 0.0 X-RAY
 2008-05-13 HIS A:142 A:252 43.0 0.221 H -66.1 -33.9 39.0 0.2 0.021 B:P03372:0.021
 HOH
 2.720
 N
 O
3cbp 1 Q8WTS6 100.0 0.0 X-RAY
 2008-05-13 HIS A:142 A:252 48.0 0.246 H -63.4 -37.3 39.0 0.2 0.046 B:P03372:0.046
 HOH
 2.917
 ND1
 O
3os5 1 Q8WTS6 100.0 0.0 X-RAY
 2010-12-15 HIS A:142 A:252 46.0 0.236 H -68.7 -31.5 39.0 0.2 0.036 B:None:0.036
 EDO
HOH
 4.069
2.849
 O
ND1
 C1
O
4j7f 1 Q8WTS6 99.61 0.0 X-RAY
 2014-03-26 HIS A:147 A:252 50.0 0.256 H -59.7 -35.7 23.0 0.118 0.138 B:Q12962:0.138
 HOH
 2.616
 ND1
 O
3m57 1 Q8WTS6 99.61 0.0 X-RAY
 2010-07-28 HIS A:147 A:252 44.0 0.226 H -60.5 -32.2 24.0 0.123 0.103 B:None:0.103
 HOH
 2.661
 ND1
 O
3m58 1 Q8WTS6 99.61 0.0 X-RAY
 2010-07-28 HIS A:147 A:252 45.0 0.231 H -57.2 -36.8 22.0 0.113 0.118 B:None:0.118
 HOH
 2.795
 ND1
 O
3m59 1 Q8WTS6 99.61 0.0 X-RAY
 2010-07-28 HIS A:147 A:252 46.0 0.236 H -60.5 -33.9 15.0 0.077 0.159 B:None:0.159
 HOH
 2.851
 N
 O
3m5a 1 Q8WTS6 99.61 0.0 X-RAY
 2010-07-28 HIS A:147 A:252 43.0 0.221 H -58.7 -36.4 16.0 0.082 0.139 B:None:0.138
 HOH
 2.941
 ND1
 O
1muf 1 Q8WTS6 100.0 0.0 X-RAY
 2002-11-06 HIS A:172 A:252 42.0 0.215 H -59.9 -34.8 42.0 0.215 0.0 HOH
 2.754
 ND1
 O
5ayf 1 Q8WTS6 94.92 0.0 X-RAY
 2016-04-27 HIS A:149 A:252 51.0 0.262 H -63.1 -26.7 51.0 0.262 0.0 HOH
 3.022
 ND1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8wts6-f1 1 Q8WTS6 100.0 0.0 HIS A:252 A:252 53.0 0.272 H -54.8 -41.4