Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 149181228 . G A CCDS3772.1:NM_000901.4:c.1799tCa>tTa_NP_000892.2:p.600S>L Homo sapiens nuclear receptor subfamily 3 group C member 2 (NR3C2), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4tnt 1 P08235 97.53 7e-51 X-RAY
2014-09-17 SER A:32 A:600 126.0 1.0 360.0 161.5 126.0 1.0 0.0
SER B:32 B:600 143.0 1.0 360.0 156.4 143.0 1.0 0.0
4oor 1 ? 91.46 8e-51 X-RAY
2014-10-29 GLN A:4 A:4 131.0 0.728 -78.7 137.6 131.0 0.728 0.0
GLN B:4 NA:NA DO NA DO DO DO NA NA NA
GLN C:4 E:4 129.0 0.717 -112.5 -167.4 NA NA NA
GLN D:4 F:4 215.0 1.0 360.0 -42.2 NA NA NA
4ov7 1 ? 91.46 8e-51 X-RAY
2014-10-29 GLN A:4 A:4 131.0 0.728 -78.7 137.6 131.0 0.728 0.0
GLN B:4 NA:NA DO NA DO DO DO NA NA NA
GLN C:4 E:4 129.0 0.717 -112.5 -167.4 NA NA NA
GLN D:4 F:4 215.0 1.0 360.0 -42.2 NA NA NA
5cbz 1 ? 91.67 9e-51 X-RAY
2015-12-23 SER A:28 A:418 133.0 1.0 360.0 -170.3 133.0 1.0 0.0
SER B:28 B:418 138.0 1.0 360.0 128.0 138.0 1.0 0.0
SER E:28 E:418 80.0 0.696 60.6 81.4 NA NA NA
SER F:28 F:418 71.0 0.617 -65.0 143.1 NA NA NA
5cc0 1 ? 88.24 1e-50 X-RAY
2015-12-23 GLN A:7 A:418 203.0 1.0 360.0 153.1 203.0 1.0 0.0 DC
9.486
CB
OP2
GLN D:7 B:418 191.0 1.0 360.0 -129.2 191.0 1.0 0.0
5cc1 1 P04150 84.62 7e-50 X-RAY
2015-12-23 PRO A:26 A:418 112.0 0.772 -68.5 129.5 112.0 0.772 0.0 HOH
8.974
O
O
PRO B:26 B:418 140.0 0.966 360.0 124.5 140.0 0.966 0.0
PRO E:26 W:418 100.0 0.69 -66.6 142.9 NA NA NA
PRO F:26 X:418 142.0 0.979 360.0 129.9 NA NA NA
3fyl 1 P06536 85.06 8e-49 X-RAY
2009-04-21 SER A:2 A:437 154.0 1.0 360.0 -130.5 154.0 1.0 0.0 HOH
6.915
CB
O
SER B:2 B:437 116.0 NA 360.0 109.5 116.0 NA NA HOH
7.413
CB
O
3g6p 3 P06536 85.06 8e-49 X-RAY
2009-04-21 SER C:2 A:437 125.0 NA 360.0 -13.1 125.0 NA NA HOH
7.444
O
O
SER D:2 B:437 137.0 NA 360.0 36.2 137.0 NA NA HOH
2.907
CA
O
3g6q 1 P06536 85.06 8e-49 X-RAY
2009-04-21 SER A:2 B:437 153.0 1.0 360.0 -131.4 153.0 1.0 0.0
SER B:2 NA:NA DO NA DO DO DO NA NA NA
3g6r 3 P06536 85.06 8e-49 X-RAY
2009-04-21 SER C:2 B:437 139.0 NA 360.0 146.3 139.0 NA NA HOH
3.579
CA
O
SER D:2 A:437 133.0 NA 360.0 -2.6 133.0 NA NA DC
HOH
9.534
3.874
O
N
OP2
O
3g6u 1 P06536 85.06 8e-49 X-RAY
2009-04-21 SER A:2 A:437 133.0 NA 360.0 123.9 133.0 NA NA HOH
3.849
CB
O
SER B:2 B:437 146.0 NA 360.0 59.9 146.0 NA NA
3g8u 1 P06536 85.06 8e-49 X-RAY
2009-04-21 SER A:2 A:437 150.0 1.0 360.0 -149.7 150.0 1.0 0.0 HOH
7.127
OG
O
SER B:2 NA:NA DO NA DO DO DO NA NA NA
3g8x 1 P06536 85.06 8e-49 X-RAY
2009-04-21 SER A:2 NA:NA DO NA DO DO DO NA NA NA
SER B:2 NA:NA DO NA DO DO DO NA NA NA
3g97 1 P06536 85.06 8e-49 X-RAY
2009-04-21 SER A:2 NA:NA DO NA DO DO DO NA NA NA
SER B:2 NA:NA DO NA DO DO DO NA NA NA
3g99 1 P06536 85.06 8e-49 X-RAY
2009-04-21 SER A:2 A:437 144.0 NA 360.0 81.8 144.0 NA NA HOH
3.466
N
O
SER B:2 NA:NA DO NA DO DO DO NA NA NA
3g9i 1 P06536 85.06 8e-49 X-RAY
2009-04-21 SER A:2 A:437 126.0 NA 360.0 120.5 126.0 NA NA HOH
9.265
CB
O
SER B:2 B:437 128.0 NA 360.0 -164.8 128.0 NA NA DT
HOH
2.601
7.429
O
CB
N3
O
3g9j 3 P06536 85.06 8e-49 X-RAY
2009-04-21 SER C:2 A:437 130.0 NA 360.0 -142.4 130.0 NA NA DC
HOH
9.965
3.244
N
O
OP1
O
SER D:2 B:437 123.0 NA 360.0 164.3 123.0 NA NA HOH
2.748
CB
O
3g9m 1 P06536 85.06 8e-49 X-RAY
2009-04-21 SER A:2 A:437 151.0 1.0 360.0 39.6 151.0 1.0 0.0 HOH
3.647
N
O
SER B:2 NA:NA DO NA DO DO DO NA NA NA
3g9o 1 P06536 85.06 8e-49 X-RAY
2009-04-21 SER A:2 B:437 147.0 1.0 360.0 -14.8 147.0 1.0 0.0 HOH
4.210
N
O
SER B:2 A:437 137.0 NA 360.0 151.1 137.0 NA NA HOH
3.010
CB
O
3g9p 1 P06536 85.06 8e-49 X-RAY
2009-04-14 SER A:2 B:437 147.0 1.0 360.0 -14.8 147.0 1.0 0.0 HOH
4.210
N
O
SER B:2 A:437 137.0 NA 360.0 151.1 137.0 NA NA HOH
3.010
CB
O
1r4o 2 P06536 83.15 8e-49 X-RAY
2003-10-21 ALA C:4 A:437 55.0 0.478 -130.2 120.4 55.0 0.478 0.0 HOH
3.980
C
O
ALA D:4 B:437 75.0 0.652 -68.2 143.5 75.0 0.652 0.0 HOH
2.442
CB
O
1r4r 3 P06536 83.15 8e-49 X-RAY
2003-10-28 ALA C:4 NA:NA DO NA DO DO DO NA NA NA
ALA D:4 B:437 37.0 0.322 -92.7 62.6 37.0 0.322 0.0 DT
9.348
CB
OP2
4ond 1 ? 87.8 1e-48 X-RAY
2014-10-29 GLN A:4 A:4 185.0 1.0 360.0 105.5 185.0 1.0 0.0 HOH
4.204
O
O
GLN B:4 NA:NA DO NA DO DO DO NA NA NA
GLN C:4 E:4 190.0 1.0 360.0 130.1 NA NA NA
GLN D:4 F:4 220.0 1.0 360.0 -26.0 NA NA NA
5e69 1 P04150 83.52 1e-48 X-RAY
2017-02-08 PRO A:26 A:418 148.0 1.0 360.0 -150.5 148.0 1.0 0.0 DA
DG
HOH
8.953
8.110
6.483
O
CD
CD
OP1
OP1
O
PRO D:26 B:418 172.0 1.0 360.0 -7.9 172.0 1.0 0.0
5e6a 1 P04150 83.52 1e-48 X-RAY
2017-02-08 PRO A:26 A:418 167.0 1.0 360.0 157.3 167.0 1.0 0.0 DT
DG
HOH
9.597
9.407
6.396
O
O
CB
OP1
OP1
O
PRO D:26 B:418 187.0 1.0 360.0 25.6 187.0 1.0 0.0
5e6b 1 P04150 83.52 1e-48 X-RAY
2017-02-08 PRO A:26 A:418 97.0 0.669 -95.1 -177.2 97.0 0.669 0.0 HOH
6.572
O
O
PRO D:26 B:418 184.0 1.0 360.0 -30.9 184.0 1.0 0.0 HOH
5.068
O
O
5e6c 1 P04150 83.52 1e-48 X-RAY
2017-02-08 PRO A:26 A:418 158.0 1.0 360.0 90.9 158.0 1.0 0.0
PRO B:26 NA:NA DO NA DO DO DO NA NA NA
5e6d 3 P04150 83.52 1e-48 X-RAY
2017-02-08 PRO C:26 A:418 142.0 0.979 360.0 -146.5 142.0 0.979 0.0
PRO D:26 NA:NA DO NA DO DO DO NA NA NA
5cbx 1 ? 92.41 2e-48 X-RAY
2015-12-23 PRO A:28 NA:NA DO NA DO DO DO NA NA NA
PRO B:28 B:418 82.0 0.566 -68.8 151.3 82.0 0.566 0.0 HOH
6.805
O
O
PRO E:28 E:418 88.0 0.607 -62.4 144.1 NA NA NA
PRO F:28 F:418 106.0 0.731 -73.8 139.8 NA NA NA
5emc 2 P04150 87.21 4e-48 X-RAY
2016-06-29 PRO B:12 NA:NA DO NA DO DO DO NA NA NA
PRO C:12 B:437 177.0 1.0 360.0 166.0 177.0 1.0 0.0 HOH
3.098
N
O
5emp 1 P04150 87.21 4e-48 X-RAY
2016-06-29 PRO A:12 NA:NA DO NA DO DO DO NA NA NA
PRO B:12 NA:NA DO NA DO DO DO NA NA NA
5emq 3 P04150 87.21 4e-48 X-RAY
2016-06-29 PRO C:12 NA:NA DO NA DO DO DO NA NA NA
PRO D:12 B:437 154.0 1.0 360.0 153.0 154.0 1.0 0.0 HOH
9.370
CA
O
2c7a 1 P06401 87.18 9e-48 X-RAY
2006-08-30 GLN A:2 A:564 125.0 0.694 -73.4 128.0 125.0 0.694 0.0 HOH
3.424
CG
O
GLN B:2 B:564 136.0 0.756 157.3 122.5 136.0 0.756 0.0 HOH
3.840
O
O
1glu 2 P06536 87.5 3e-47 X-RAY
1994-01-31 ALA C:4 A:437 39.0 0.339 108.6 69.8 39.0 0.339 0.0 DC
9.653
N
OP1
ALA D:4 B:437 86.0 0.748 -173.0 141.6 86.0 0.748 0.0 HOH
9.221
C
O
3g6t 1 P06536 84.09 3e-47 X-RAY
2009-04-21 SER A:2 A:437 141.0 1.0 360.0 -80.6 141.0 1.0 0.0 HOH
2.875
N
O
SER B:2 NA:NA DO NA DO DO DO NA NA NA
5cby 1 ? 91.14 4e-47 X-RAY
2015-12-23 PRO A:28 A:418 114.0 0.786 -71.5 138.8 114.0 0.786 0.0 HOH
3.559
O
O
PRO B:28 B:418 160.0 1.0 360.0 -151.3 160.0 1.0 0.0
4hn6 1 P04150 81.32 1e-46 X-RAY
2012-12-12 PRO A:26 NA:NA DO NA DO DO DO NA NA NA
PRO D:26 NA:NA DO NA DO DO DO NA NA NA
6x6e 1 P04150 90.67 9e-46 X-RAY
2021-06-02 PRO A:2 NA:NA DO NA DO DO DO NA NA NA
PRO B:2 NA:NA DO NA DO DO DO NA NA NA
6x6d 1 P04150 90.54 7e-45 X-RAY
2021-06-02 PRO A:2 A:418 113.0 0.779 -37.7 127.9 113.0 0.779 0.0
PRO B:2 B:418 159.0 1.0 360.0 47.2 159.0 1.0 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p08235-f1 1 P08235 100.0 0.0 SER A:600 A:600 80.0 0.696 -73.8 120.7