Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 155526147 . G A CCDS47153.1:NM_000509.4:c.1201Cgg>Tgg_NP_000500.2:p.401R>W Homo sapiens fibrinogen gamma chain (FGG), transcript variant gamma-A, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ghg 3 P02679 100.0 0.0 X-RAY
 2009-05-19 ARG C:375 C:375 38.0 0.169 T -61.3 -24.3 33.0 0.147 0.022 M:None:0.022
ARG F:375 F:375 60.0 0.267 T -59.6 -51.0 42.0 0.187 0.08 N:None:0.08
ARG I:375 I:375 69.0 0.307 T -75.2 0.0 NA NA NA
ARG L:375 L:375 68.0 0.302 T -71.1 -1.0 NA NA NA
1n86 3 6650830 100.0 0.0 X-RAY
 2003-01-07 ARG C:288 C:375 47.0 0.209 T -71.7 -12.1 40.0 0.178 0.031 G:P02671:0.031
ARG F:288 F:375 49.0 0.218 T -71.5 -12.1 42.0 0.187 0.031 H:P02671:0.031
2hlo 3 Q53Y18 100.0 0.0 X-RAY
 2007-07-17 ARG C:288 C:375 83.0 0.369 T -67.6 2.5 70.0 0.311 0.058 G:None:0.058
 HOH
 7.695
 C
 O
ARG F:288 F:375 64.0 0.284 T -78.4 -6.6 NA NA NA
2q9i 3 Q53Y18 100.0 0.0 X-RAY
 2007-12-11 ARG C:288 C:375 85.0 0.378 T -62.3 -1.3 74.0 0.329 0.049 G:None:0.049
ARG F:288 F:375 82.0 0.364 T -69.2 -4.8 NA NA NA
2z4e 3 Q53Y18 100.0 0.0 X-RAY
 2007-10-23 ARG C:288 C:375 80.0 0.356 T -65.3 -8.6 71.0 0.316 0.04 G:None:0.04
ARG F:288 F:375 77.0 0.342 T -67.6 -22.3 64.0 0.284 0.058 H:None:0.058
2h43 3 P02679 100.0 0.0 X-RAY
 2006-12-05 ARG C:287 C:375 43.0 0.191 T -63.2 -10.6 43.0 0.191 0.0
ARG F:287 F:375 46.0 0.204 T -66.2 -13.3 NA NA NA
2hod 3 Q53Y18 100.0 0.0 X-RAY
 2007-05-29 ARG C:287 C:375 74.0 0.329 S -100.9 21.6 65.0 0.289 0.04 O:None:0.04
ARG F:287 F:375 54.0 0.24 S -83.3 -15.0 NA NA NA
ARG I:287 I:375 73.0 0.324 S -99.4 22.2 NA NA NA
ARG L:287 L:375 55.0 0.244 S -84.3 -14.6 NA NA NA
2hpc 3 Q53Y18 100.0 0.0 X-RAY
 2007-05-29 ARG C:287 C:375 65.0 0.289 S -79.7 -15.3 56.0 0.249 0.04 O:None:0.04
ARG F:287 F:375 43.0 0.191 S -95.0 -5.6 NA NA NA
ARG I:287 I:375 65.0 0.289 S -79.8 -14.7 NA NA NA
ARG L:287 L:375 45.0 0.2 S -94.3 -4.5 NA NA NA
1fza 3 P02679 100.0 0.0 X-RAY
 1997-12-03 ARG C:288 C:375 38.0 0.169 T -65.9 -12.6 38.0 0.169 0.0
ARG F:288 F:375 39.0 0.173 T -65.9 -12.7 39.0 0.173 0.0
1fzb 3 P02679 100.0 0.0 X-RAY
 1997-12-03 ARG C:288 C:375 45.0 0.2 T -69.5 -0.1 33.0 0.147 0.053 G:None:0.053
ARG F:288 F:375 46.0 0.204 T -66.4 -1.0 38.0 0.169 0.035 H:None:0.036
1fzc 3 P02679 100.0 0.0 X-RAY
 1998-10-14 ARG C:288 C:375 42.0 0.187 T -72.0 -5.5 38.0 0.169 0.018 G:None:0.018
 HOH
 4.601
 N
 O
ARG F:288 F:375 47.0 0.209 T -65.9 -14.4 39.0 0.173 0.036 H:None:0.036
 HOH
 2.952
 NH1
 O
1fze 3 P02679 100.0 0.0 X-RAY
 1999-06-08 ARG C:288 C:375 48.0 0.213 T -81.9 -8.0 48.0 0.213 0.0
ARG F:288 F:375 49.0 0.218 T -80.6 -9.4 49.0 0.218 0.0
1fzf 3 P02679 100.0 0.0 X-RAY
 1999-06-08 ARG C:288 C:375 91.0 0.404 T -63.0 -14.3 85.0 0.378 0.026 G:P02675:0.027
ARG F:288 F:375 92.0 0.409 T -64.1 -12.3 70.0 0.311 0.098 H:P02675:0.098
1fzg 3 P02679 100.0 0.0 X-RAY
 1999-06-08 ARG C:288 C:375 81.0 0.36 T -57.2 -16.8 74.0 0.329 0.031 G:None:0.031
 CA
HOH
 9.940
3.954
 NH2
CA
 CA
O
ARG F:288 F:375 84.0 0.373 T -66.3 -4.4 64.0 0.284 0.089 H:None:0.089
 HOH
 6.455
 NH1
 O
2xnx 3 P02679 100.0 0.0 X-RAY
 2011-04-13 ARG C:288 C:375 85.0 0.378 T -84.2 11.1 85.0 0.378 0.0
ARG F:288 F:375 78.0 0.347 T -82.6 18.0 78.0 0.347 0.0
ARG I:288 I:375 77.0 0.342 T -68.3 -16.1 77.0 0.342 0.0
ARG L:288 L:375 82.0 0.364 T -76.1 22.7 82.0 0.364 0.0
2xny 3 P02679 100.0 0.0 X-RAY
 2011-04-13 ARG C:288 C:375 81.0 0.36 T -63.1 -9.4 81.0 0.36 0.0
ARG F:288 F:375 82.0 0.364 T -63.1 -9.3 NA NA NA
3e1i 3 P02679 100.0 0.0 X-RAY
 2009-01-13 ARG C:288 C:375 83.0 0.369 T -63.1 -9.3 78.0 0.347 0.022 G:None:0.022
 HOH
 2.713
 NH2
 O
ARG F:288 F:375 74.0 0.329 T -63.8 -12.3 NA NA NA
3h32 3 P02679 100.0 0.0 X-RAY
 2009-07-28 ARG C:281 C:375 49.0 0.218 T -61.2 -9.5 49.0 0.218 0.0
ARG F:281 F:375 65.0 0.289 T -56.3 -9.8 65.0 0.289 0.0
1lt9 3 P02679 100.0 0.0 X-RAY
 2002-11-06 ARG C:280 C:375 41.0 0.182 T -68.9 7.1 41.0 0.182 0.0
ARG F:280 F:375 52.0 0.231 T -53.0 -18.2 NA NA NA
1ltj 3 P02679 100.0 0.0 X-RAY
 2002-11-06 ARG C:280 C:375 62.0 0.276 T -60.2 -8.6 49.0 0.218 0.058 G:None:0.058
ARG F:280 F:375 46.0 0.204 T -64.5 -8.6 NA NA NA
1re3 3 P02679 100.0 0.0 X-RAY
 2004-05-25 ARG C:280 C:375 78.0 0.347 T -61.0 -15.0 75.0 0.333 0.014 G:None:0.013
 CA
HOH
 9.823
2.594
 NH2
NH2
 CA
O
ARG F:280 F:375 71.0 0.316 T -64.1 -4.8 NA NA NA
1re4 3 P02679 100.0 0.0 X-RAY
 2004-05-25 ARG C:280 C:375 39.0 0.173 T -70.7 -7.4 39.0 0.173 0.0
ARG F:280 F:375 56.0 0.249 T -51.6 -6.7 NA NA NA
2ffd 3 P02679 100.0 0.0 X-RAY
 2006-07-04 ARG C:280 C:375 66.0 0.293 T -63.3 7.9 51.0 0.227 0.066 G:None:0.067
ARG F:280 F:375 47.0 0.209 T -65.4 -14.5 NA NA NA
1rf0 3 P02679 99.68 0.0 X-RAY
 2004-03-16 ARG C:280 C:375 40.0 0.178 T -63.2 20.5 40.0 0.178 0.0 HOH
 6.887
 O
 O
ARG F:280 F:375 57.0 0.253 T -48.1 -4.5 NA NA NA
1rf1 3 P02679 99.68 0.0 X-RAY
 2004-03-16 ARG C:280 C:375 65.0 0.289 T -56.8 -29.5 48.0 0.213 0.076 G:None:0.076
ARG F:280 F:375 66.0 0.293 T -63.6 -8.7 NA NA NA
3hus 3 P02679 99.68 0.0 X-RAY
 2009-08-18 ARG C:280 C:375 52.0 0.231 T -60.0 -30.1 37.0 0.164 0.067 G:None:0.067
ARG F:280 F:375 53.0 0.236 T -67.5 -13.5 NA NA NA
2oyh 3 P02679 99.36 0.0 X-RAY
 2007-05-15 ARG C:280 C:375 53.0 0.236 T -52.8 -16.7 40.0 0.178 0.058 G:None:0.058
 HOH
 4.271
 N
 O
ARG F:280 F:375 62.0 0.276 T -58.7 -10.9 NA NA NA
2oyi 3 P02679 99.36 0.0 X-RAY
 2007-05-15 ARG C:280 C:375 82.0 0.364 T -61.9 -15.6 69.0 0.307 0.057 G:None:0.058
 HOH
 9.938
 O
 O
ARG F:280 F:375 53.0 0.236 T -52.8 -16.4 NA NA NA
3bvh 3 P02679 99.66 0.0 X-RAY
 2008-09-02 ARG C:274 C:375 70.0 0.311 T -49.5 -20.3 51.0 0.227 0.084 H:None:0.084
 HOH
 3.752
 NH1
 O
ARG F:274 F:375 67.0 0.298 T -62.3 -17.9 NA NA NA
1fib 1 P02679 100.0 0.0 X-RAY
 1997-04-01 ARG A:233 A:375 51.0 0.227 T -62.2 -9.9 51.0 0.227 0.0 HOH
 2.674
 NH1
 O
1fic 1 P02679 100.0 0.0 X-RAY
 1997-04-01 ARG A:233 A:375 51.0 0.227 T -66.7 -10.4 39.0 0.173 0.054 B:P02679:0.053
 HOH
 2.846
 N
 O
ARG B:233 B:375 45.0 0.2 T -64.9 -17.0 45.0 0.2 0.0 HOH
 2.918
 N
 O
1fid 1 P02679 100.0 0.0 X-RAY
 1997-04-01 ARG A:233 A:375 63.0 0.28 T -70.1 -12.0 63.0 0.28 0.0 HOH
 2.980
 N
 O
2fib 1 P02679 100.0 0.0 X-RAY
 1997-10-15 ARG A:233 A:375 59.0 0.262 T -58.4 -15.8 47.0 0.209 0.053 B:None:0.053
 HOH
 3.872
 NH1
 O
3fib 1 P02679 100.0 0.0 X-RAY
 1997-09-17 ARG A:232 A:375 50.0 0.222 T -62.7 -12.0 50.0 0.222 0.0 HOH
 2.655
 NH1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02679-f1 1 P02679 99.77 0.0 ARG A:401 A:401 32.0 0.142 T -59.8 -8.0