Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 44709858 . G A CCDS3469.1:NM_138335.2:c.680tCc>tTc_NP_612208.1:p.227S>F Homo sapiens glucosamine-6-phosphate deaminase 2 (GNPDA2), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ne7 1 P46926 87.96 0.0 X-RAY
 2003-09-23 SER A:227 A:227 0.0 0.0 G -62.1 -17.8 0.0 0.0 0.0 HOH
 3.439
 CA
 O
SER B:227 B:227 0.0 0.0 G -65.3 -16.7 0.0 0.0 0.0 HOH
 3.636
 CA
 O
SER C:227 C:227 0.0 0.0 G -65.5 -17.3 0.0 0.0 0.0 HOH
 3.527
 CA
 O
SER D:227 D:227 0.0 0.0 G -66.2 -18.1 0.0 0.0 0.0 HOH
 3.609
 CA
 O
SER E:227 E:227 0.0 0.0 G -64.0 -18.5 0.0 0.0 0.0 HOH
 3.529
 CA
 O
SER F:227 F:227 0.0 0.0 G -66.4 -14.7 0.0 0.0 0.0 HOH
 3.581
 OG
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8tdq7-f1 1 Q8TDQ7 100.0 0.0 SER A:227 A:227 0.0 0.0 G -60.5 -19.1
af-p46926-f1 1 P46926 87.96 0.0 SER A:227 A:227 0.0 0.0 G -63.5 -20.8