Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 44713089 . A C CCDS3469.1:NM_138335.2:c.475Tta>Gta_NP_612208.1:p.159L>V Homo sapiens glucosamine-6-phosphate deaminase 2 (GNPDA2), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ne7 1 P46926 87.96 0.0 X-RAY
 2003-09-23 VAL A:159 A:159 44.0 0.284 E -87.1 137.4 44.0 0.284 0.0 16G
HOH
 2.516
2.957
 O
N
 O3
O
VAL B:159 B:159 48.0 0.31 E -85.6 136.8 48.0 0.31 0.0 16G
HOH
 2.442
2.876
 O
N
 O3
O
VAL C:159 C:159 40.0 0.258 E -85.7 140.7 40.0 0.258 0.0 16G
HOH
 2.611
2.822
 O
N
 O3
O
VAL D:159 D:159 41.0 0.265 E -87.4 139.4 41.0 0.265 0.0 16G
HOH
 2.578
2.948
 O
N
 O3
O
VAL E:159 E:159 45.0 0.29 E -86.2 138.2 45.0 0.29 0.0 16G
HOH
 2.499
2.969
 O
N
 O3
O
VAL F:159 F:159 46.0 0.297 E -85.3 135.9 46.0 0.297 0.0 16G
HOH
 2.477
2.919
 O
N
 O3
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8tdq7-f1 1 Q8TDQ7 100.0 0.0 LEU A:159 A:159 64.0 0.376 E -66.5 134.9
af-p46926-f1 1 P46926 87.96 0.0 VAL A:159 A:159 48.0 0.31 E -68.6 133.5