Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 44719250 . T A CCDS3469.1:NM_138335.2:c.289Atc>Ttc_NP_612208.1:p.97I>F Homo sapiens glucosamine-6-phosphate deaminase 2 (GNPDA2), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ne7 1 P46926 87.96 0.0 X-RAY
 2003-09-23 ILE A:97 A:97 16.0 0.091 S -126.8 -179.7 16.0 0.091 0.0 HOH
 2.859
 O
 O
ILE B:97 B:97 14.0 0.08 S -125.7 166.4 14.0 0.08 0.0 HOH
 2.674
 O
 O
ILE C:97 C:97 16.0 0.091 S -128.3 179.3 16.0 0.091 0.0 HOH
 3.257
 O
 O
ILE D:97 D:97 15.0 0.086 S -125.8 175.8 15.0 0.086 0.0 HOH
 3.402
 O
 O
ILE E:97 E:97 16.0 0.091 S -128.6 176.5 16.0 0.091 0.0 HOH
 2.982
 O
 O
ILE F:97 F:97 15.0 0.086 S -121.2 175.8 15.0 0.086 0.0 HOH
 4.969
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8tdq7-f1 1 Q8TDQ7 100.0 0.0 ILE A:97 A:97 17.0 0.097 S -131.0 170.9
af-p46926-f1 1 P46926 87.96 0.0 ILE A:97 A:97 15.0 0.086 S -130.4 168.4