Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr5 | 132015565 | . | T | A | CCDS4158.1:NM_000589.3:c.343Tgg>Agg_NP_000580.1:p.115W>R | Homo sapiens interleukin 4 (IL4), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
4ydy | 2 | P05112 | 100.0 | 1e-92 |
X-RAY |
2015-03-04 | TRP | B:92 | I:91 | 121.0 | 0.475 | H | -53.1 | -39.1 | 2.0 | 0.008 | 0.467 |
A:None:0.467 |
HOH |
2.893 |
O |
O |
|
TRP | D:92 | J:91 | 125.0 | 0.49 | H | -57.5 | -37.0 | NA | NA | NA | |||||||||||||
1hik | 1 | P05112 | 100.0 | 2e-92 |
X-RAY |
1996-01-29 | TRP | A:91 | A:91 | 53.0 | 0.208 | H | -71.5 | -52.0 | 53.0 | 0.208 | 0.0 | ||||||
1iar | 1 | P05112 | 100.0 | 2e-92 |
X-RAY |
2000-03-03 | TRP | A:91 | A:91 | 71.0 | 0.278 | H | -62.7 | -42.2 | 35.0 | 0.137 | 0.141 |
B:P24394:0.141 |
HOH |
2.584 |
O |
O |
|
1rcb | 1 | P05112 | 100.0 | 2e-92 |
X-RAY |
1993-10-31 | TRP | A:91 | A:91 | 57.0 | 0.224 | H | -67.7 | -18.3 | 57.0 | 0.224 | 0.0 |
HOH |
3.690 |
CZ2 |
O |
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2b8u | 1 | P05112 | 100.0 | 2e-92 |
X-RAY |
2006-05-30 | TRP | A:91 | A:91 | 58.0 | 0.227 | H | -62.4 | -35.9 | 58.0 | 0.227 | 0.0 |
SO4 HOH |
6.954 3.652 |
NE1 CZ2 |
O3 O |
||
2int | 1 | P05112 | 100.0 | 2e-92 |
X-RAY |
1994-01-31 | TRP | A:91 | A:91 | 53.0 | 0.208 | H | -59.7 | -39.6 | 53.0 | 0.208 | 0.0 | ||||||
3bpl | 1 | P05112 | 100.0 | 2e-92 |
X-RAY |
2008-02-05 | TRP | A:91 | A:91 | 77.0 | 0.302 | H | -65.4 | -44.0 | 41.0 | 0.161 | 0.141 |
B:P24394:0.141 |
HOH |
4.256 |
CD1 |
O |
|
3bpn | 1 | P05112 | 100.0 | 2e-92 |
X-RAY |
2008-02-05 | TRP | A:91 | A:91 | 70.0 | 0.275 | H | -50.3 | -55.9 | 49.0 | 0.192 | 0.083 |
B:P24394:0.082 |
|||||
1hij | 1 | P05112 | 99.22 | 1e-91 |
X-RAY |
1996-01-29 | TRP | A:91 | A:91 | 45.0 | 0.176 | H | -61.3 | -38.2 | 45.0 | 0.176 | 0.0 | ||||||
1hzi | 1 | P05112 | 99.22 | 1e-91 |
X-RAY |
2001-08-29 | TRP | A:91 | A:91 | 52.0 | 0.204 | H | -61.7 | -36.9 | 52.0 | 0.204 | 0.0 |
HOH |
2.908 |
O |
O |
||
2d48 | 1 | P05112 | 99.22 | 1e-91 |
X-RAY |
2006-05-30 | TRP | A:91 | A:91 | 58.0 | 0.227 | H | -60.4 | -36.8 | 58.0 | 0.227 | 0.0 |
HOH |
3.568 |
CZ2 |
O |
||
1bbn | 1 | P05112 | 96.21 | 2e-91 |
NMR |
1993-10-31 | TRP | A:95 | A:95 | 54.0 | 0.212 | H | -88.9 | -22.0 | 54.0 | 0.212 | 0.0 | ||||||
2b8z | 1 | P05112 | 99.22 | 2e-91 |
X-RAY |
2006-05-30 | TRP | A:91 | A:91 | 52.0 | 0.204 | H | -65.2 | -38.3 | 52.0 | 0.204 | 0.0 |
SO4 HOH |
7.177 2.922 |
NE1 NE1 |
O3 O |
||
2b8x | 1 | P05112 | 99.22 | 4e-91 |
X-RAY |
2006-05-30 | TRP | A:91 | A:91 | 60.0 | 0.235 | H | -63.9 | -34.5 | 60.0 | 0.235 | 0.0 |
SO4 HOH |
7.067 3.515 |
NE1 CZ2 |
O3 O |
||
2b90 | 1 | P05112 | 98.45 | 1e-90 |
X-RAY |
2006-05-30 | TRP | A:91 | A:91 | 64.0 | 0.251 | H | -62.8 | -40.6 | 64.0 | 0.251 | 0.0 |
SO4 HOH |
7.146 3.759 |
NE1 CB |
O3 O |
||
2b8y | 1 | P05112 | 98.45 | 2e-90 |
X-RAY |
2006-05-30 | TRP | A:91 | A:91 | 57.0 | 0.224 | H | -63.1 | -39.1 | 57.0 | 0.224 | 0.0 |
SO4 HOH |
7.200 3.684 |
NE1 CZ2 |
O3 O |
||
2b91 | 1 | P05112 | 98.45 | 3e-90 |
X-RAY |
2006-05-30 | TRP | A:91 | A:91 | 53.0 | 0.208 | H | -64.0 | -36.3 | 53.0 | 0.208 | 0.0 |
SO4 HOH |
7.101 2.709 |
NE1 O |
O3 O |
||
5fhx | 1 | P05112 | 100.0 | 6e-88 |
X-RAY |
2016-03-30 | TRP | A:86 | A:91 | 41.0 | 0.161 | H | -58.8 | -37.5 | 41.0 | 0.161 | 0.0 |
HOH |
5.823 |
CZ2 |
O |
||
6oel | 1 | P05112 | 93.8 | 8e-87 |
X-RAY |
2019-08-07 | TRP | A:91 | A:91 | 124.0 | 0.486 | H | -71.7 | -48.3 | 54.0 | 0.212 | 0.274 |
B:P24394:0.275 |
NAG |
8.289 |
CH2 |
O6 |
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3qb7 | 1 | D4HNR6 | 93.8 | 1e-86 |
X-RAY |
2012-04-25 | TRP | A:94 | A:91 | 70.0 | 0.275 | H | -62.3 | -42.4 | 70.0 | 0.275 | 0.0 | ||||||
TRP | B:94 | B:91 | 90.0 | 0.353 | H | -56.2 | -36.8 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p05112-f1 | 1 | P05112 | 100.0 | 9e-113 | TRP | A:115 | A:115 | 65.0 | 0.255 | H | -61.6 | -41.4 |