Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158743788 . C A CCDS4346.1:NM_002187.2:c.892Gtc>Ttc_NP_002178.2:p.298V>F Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 VAL B:298 B:276 15.0 0.097 E -135.3 169.0 15.0 0.097 0.0 HOH
 3.419
 CB
 O
VAL D:298 D:276 11.0 0.071 E -136.5 168.8 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 VAL B:298 A:298 11.0 0.071 E -132.2 161.1 11.0 0.071 0.0
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 VAL A:298 A:298 13.0 0.084 E -142.1 172.0 13.0 0.084 0.0
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 VAL A:298 A:298 17.0 0.11 E -144.9 -179.9 17.0 0.11 0.0
VAL C:298 C:298 12.0 0.077 E -136.0 175.5 NA NA NA
VAL E:298 E:298 15.0 0.097 E -137.4 -177.9 NA NA NA
VAL G:298 G:298 11.0 0.071 E -139.5 176.2 NA NA NA
VAL I:298 I:298 13.0 0.084 E -141.0 -178.6 NA NA NA
VAL K:298 K:298 12.0 0.077 E -143.9 177.8 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 VAL A:278 A:298 13.0 0.084 E -136.8 -177.7 13.0 0.084 0.0
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 VAL A:278 A:276 13.0 0.084 E -121.2 164.0 13.0 0.084 0.0 HOH
 7.917
 CG1
 O
VAL B:278 B:276 11.0 0.071 E -122.4 166.5 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 VAL A:276 A:276 12.0 0.077 E -139.4 169.6 12.0 0.077 0.0 HOH
 7.800
 CG1
 O
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 VAL A:276 A:276 8.0 0.052 E -124.3 -171.9 8.0 0.052 0.0
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 VAL A:276 A:276 55.0 0.355 -129.6 -161.3 55.0 0.355 0.0
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 VAL A:276 A:276 12.0 0.077 E -131.1 166.8 12.0 0.077 0.0
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 VAL A:276 A:298 15.0 0.097 E -138.0 174.3 15.0 0.097 0.0 NA
HOH
 8.843
2.783
 O
HG12
 NA
O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 VAL A:276 A:298 18.0 0.116 -137.9 172.0 18.0 0.116 0.0
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 VAL B:280 B:276 11.0 0.071 E -131.2 168.9 11.0 0.071 0.0
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 VAL D:276 D:276 14.0 0.09 E -128.9 169.8 14.0 0.09 0.0 HOH
 4.999
 N
 O
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 VAL B:276 B:276 13.0 0.084 E -115.4 -179.2 13.0 0.084 0.0
VAL D:276 D:276 26.0 0.168 E -135.1 144.4 26.0 0.168 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 VAL A:298 A:298 12.0 0.077 E -135.2 162.2