Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158747334 . C A CCDS4346.1:NM_002187.2:c.677aGc>aTc_NP_002178.2:p.226S>I Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 SER B:226 B:204 74.0 0.643 E -123.4 125.7 74.0 0.643 0.0 HOH
 3.950
 O
 O
SER D:226 D:204 67.0 0.583 E -124.8 125.8 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 SER B:226 A:226 68.0 0.591 E -117.0 131.7 67.0 0.583 0.008 A:Q9NPF7:0.009
 HOH
 4.376
 O
 O
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 SER A:226 A:226 71.0 0.617 E -118.9 142.7 71.0 0.617 0.0 HOH
 7.293
 HB2
 O
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 SER A:226 A:226 67.0 0.583 E -132.5 142.9 67.0 0.583 0.0
SER C:226 C:226 69.0 0.6 E -131.4 135.5 NA NA NA
SER E:226 E:226 62.0 0.539 E -135.6 140.8 NA NA NA
SER G:226 G:226 70.0 0.609 E -125.6 134.5 NA NA NA
SER I:226 I:226 68.0 0.591 E -130.0 140.7 NA NA NA
SER K:226 K:226 61.0 0.53 E -129.6 136.7 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 SER A:206 A:226 72.0 0.626 E -119.4 141.9 51.0 0.443 0.183 C:Q5VWK5:0.183
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 SER A:206 A:204 69.0 0.6 E -129.6 136.1 69.0 0.6 0.0 HOH
 4.113
 O
 O
SER B:206 B:204 73.0 0.635 E -149.4 141.0 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 SER A:204 A:204 66.0 0.574 E -121.6 132.4 66.0 0.574 0.0 HOH
 4.538
 O
 O
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 SER A:204 A:204 77.0 0.67 E -114.7 127.3 77.0 0.67 0.0 HOH
 2.875
 N
 O
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 SER A:204 A:204 66.0 0.574 E -111.3 140.7 66.0 0.574 0.0
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 SER A:204 A:204 61.0 0.53 E -143.3 133.0 17.0 0.148 0.382 C:None:0.383
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 SER A:204 A:226 64.0 0.557 E -130.6 131.9 49.0 0.426 0.131 B:Q9NPF7:0.13
 HOH
 2.225
 H
 O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 SER A:204 A:226 65.0 0.565 E -130.6 132.1 45.0 0.391 0.174 B:Q9NPF7:0.174
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 SER B:208 B:204 67.0 0.583 E -120.9 134.7 54.0 0.47 0.113 A:Q9NPF7:0.113
 HOH
 9.588
 O
 O
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 SER D:204 D:204 61.0 0.53 E -144.4 135.7 61.0 0.53 0.0 HOH
 3.970
 O
 O
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 SER B:204 B:204 72.0 0.626 E -130.0 134.8 61.0 0.53 0.096 A:Q9NPF7:0.096
SER D:204 D:204 70.0 0.609 E -127.0 133.3 68.0 0.591 0.018 C:Q9NPF7:0.017

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 SER A:226 A:226 67.0 0.583 E -123.5 125.8