Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158747374 . C A CCDS4346.1:NM_002187.2:c.637Gat>Tat_NP_002178.2:p.213D>Y Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 ASP B:213 B:191 30.0 0.2 E -95.3 132.2 30.0 0.2 0.0 NAG
NAG
HOH
 3.884
9.248
3.534
 OD1
OD1
O
 O7
O5
O
ASP D:213 D:191 37.0 0.247 E -95.8 133.0 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 ASP B:213 A:213 41.0 0.273 E -88.4 139.2 41.0 0.273 0.0 NAG
NAG
HOH
 3.911
8.622
6.930
 OD1
OD2
H
 H82
H62
O
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 ASP A:213 A:213 24.0 0.16 E -94.8 141.5 24.0 0.16 0.0 NAG
NAG
HOH
 3.826
8.340
4.114
 OD2
OD2
HB3
 O7
H62
O
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 ASP A:213 A:213 26.0 0.173 E -103.5 127.6 26.0 0.173 0.0 NAG
NAG
 3.258
9.242
 OD1
OD1
 O7
O5
ASP C:213 C:213 30.0 0.2 E -101.0 132.6 NA NA NA
ASP E:213 E:213 28.0 0.187 E -106.7 123.3 NA NA NA
ASP G:213 G:213 32.0 0.213 E -98.7 134.6 NA NA NA
ASP I:213 I:213 34.0 0.227 E -94.6 135.0 NA NA NA
ASP K:213 K:213 36.0 0.24 E -102.0 125.9 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 ASP A:193 A:213 44.0 0.293 E -98.6 134.4 44.0 0.293 0.0 NAG
 6.511
 OD1
 N2
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 ASP A:193 A:191 19.0 0.127 E -87.7 128.9 19.0 0.127 0.0 NAG
HOH
 4.068
2.750
 OD1
OD1
 O7
O
ASP B:193 B:191 13.0 0.087 E -88.0 125.4 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 ASP A:191 A:191 41.0 0.273 E -98.8 138.1 41.0 0.273 0.0 NAG
NAG
HOH
 3.400
9.111
2.745
 OD1
OD1
OD1
 C8
O5
O
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 ASP A:191 A:191 38.0 0.253 E -98.2 127.4 38.0 0.253 0.0 NAG
NAG
 3.529
9.195
 OD1
OD1
 O7
O5
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 ASP A:191 A:191 18.0 0.12 E -91.4 116.4 18.0 0.12 0.0 NAG
NAG
HOH
 3.096
9.163
4.307
 OD1
OD1
O
 O7
O5
O
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 ASP A:191 A:191 38.0 0.253 E -91.0 122.8 38.0 0.253 0.0 NAG
NAG
 3.376
8.596
 OD1
OD1
 O7
O5
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 ASP A:191 A:213 35.0 0.233 E -85.9 137.6 35.0 0.233 0.0 NAG
NAG
PG4
HOH
 3.990
8.660
3.629
2.625
 OD1
OD1
HB2
OD1
 O7
H62
H22
O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 ASP A:191 A:213 24.0 0.16 E -85.9 137.6 24.0 0.16 0.0 NAG
NAG
 3.293
8.607
 OD1
OD1
 HN2
H62
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 ASP B:195 B:191 38.0 0.253 E -90.0 128.8 38.0 0.253 0.0 NAG
NAG
HOH
 3.979
9.130
2.610
 OD1
OD1
OD2
 O7
O5
O
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 ASP D:191 D:191 17.0 0.113 E -88.9 121.4 17.0 0.113 0.0 HOH
 2.937
 OD2
 O
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 ASP B:191 B:191 8.0 0.053 E -82.5 100.3 8.0 0.053 0.0
ASP D:191 D:191 15.0 0.1 E -87.9 93.4 15.0 0.1 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 ASP A:213 A:213 7.0 0.047 E -79.0 124.8