Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158747505 . G A CCDS4346.1:NM_002187.2:c.506aCg>aTg_NP_002178.2:p.169T>M Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 THR B:169 B:147 81.0 0.579 E -114.4 124.6 81.0 0.579 0.0 HOH
 3.842
 CG2
 O
THR D:169 D:147 81.0 0.579 E -104.4 123.3 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 THR B:169 A:169 89.0 0.636 E -99.4 126.5 89.0 0.636 0.0 HOH
 3.222
 HA
 O
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 THR A:169 A:169 87.0 0.621 E -93.6 136.8 87.0 0.621 0.0
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 THR A:169 A:169 88.0 0.629 E -93.7 130.2 88.0 0.629 0.0
THR C:169 C:169 86.0 0.614 E -96.2 130.0 NA NA NA
THR E:169 E:169 82.0 0.586 E -97.1 133.9 NA NA NA
THR G:169 G:169 83.0 0.593 E -88.7 133.0 NA NA NA
THR I:169 I:169 87.0 0.621 E -96.2 130.6 NA NA NA
THR K:169 K:169 88.0 0.629 E -91.2 130.7 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 THR A:149 A:169 88.0 0.629 E -103.5 128.3 88.0 0.629 0.0
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 THR A:149 A:147 80.0 0.571 E -105.7 122.4 80.0 0.571 0.0 HOH
 3.614
 OG1
 O
THR B:149 B:147 80.0 0.571 E -108.6 120.1 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 THR A:147 A:147 85.0 0.607 E -111.6 128.2 85.0 0.607 0.0 HOH
 6.205
 C
 O
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 THR A:147 A:147 81.0 0.579 E -115.4 122.1 81.0 0.579 0.0
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 THR A:147 A:147 91.0 0.65 E -126.1 151.5 91.0 0.65 0.0
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 THR A:147 A:147 83.0 0.593 E -103.2 130.0 83.0 0.593 0.0
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 THR A:147 A:169 87.0 0.621 E -104.7 127.0 87.0 0.621 0.0 PGE
HOH
 2.845
2.985
 HB
HA
 H3
O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 THR A:147 A:169 85.0 0.607 E -105.1 129.8 85.0 0.607 0.0
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 THR B:151 B:147 86.0 0.614 E -102.5 118.6 86.0 0.614 0.0 HOH
 4.058
 O
 O
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 THR D:147 D:147 82.0 0.586 E -108.6 132.4 82.0 0.586 0.0 HOH
 3.666
 CA
 O
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 THR B:147 B:147 90.0 0.643 E -79.3 117.5 90.0 0.643 0.0
THR D:147 D:147 82.0 0.586 E -112.7 120.3 82.0 0.586 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 THR A:169 A:169 86.0 0.614 E -87.4 122.5