Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158750127 . G A CCDS4346.1:NM_002187.2:c.299tCg>tTg_NP_002178.2:p.100S>L Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 SER B:100 B:78 5.0 0.043 E -130.9 111.0 5.0 0.043 0.0 HOH
 5.216
 OG
 O
SER D:100 D:78 10.0 0.087 E -138.7 114.9 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 SER B:100 A:100 6.0 0.052 E -133.2 116.2 6.0 0.052 0.0 HOH
 2.985
 OG
 O
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 SER A:100 A:100 10.0 0.087 E -151.2 118.4 10.0 0.087 0.0 HOH
 9.973
 C
 O
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 SER A:100 A:100 3.0 0.026 E -157.5 109.7 3.0 0.026 0.0
SER C:100 C:100 5.0 0.043 E -137.1 126.3 NA NA NA
SER E:100 E:100 6.0 0.052 E -151.3 98.4 NA NA NA
SER G:100 G:100 6.0 0.052 E -154.7 117.4 NA NA NA
SER I:100 I:100 6.0 0.052 E -130.2 109.8 NA NA NA
SER K:100 K:100 9.0 0.078 E -147.9 125.0 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 SER A:80 A:100 9.0 0.078 E -157.9 118.1 9.0 0.078 0.0
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 SER A:80 A:78 8.0 0.07 E -126.7 106.0 8.0 0.07 0.0 HOH
 7.201
 OG
 O
SER B:80 B:78 6.0 0.052 E -124.8 101.7 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 SER A:78 A:78 5.0 0.043 E -138.3 101.8 5.0 0.043 0.0 HOH
 3.071
 OG
 O
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 SER A:78 A:78 8.0 0.07 174.8 104.2 8.0 0.07 0.0
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 SER A:78 A:78 3.0 0.026 E -139.4 110.8 3.0 0.026 0.0 HOH
 8.470
 O
 O
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 SER A:78 A:78 14.0 NA E -135.1 129.5 14.0 NA NA
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 SER A:78 A:100 7.0 0.061 E -139.1 115.8 7.0 0.061 0.0 PG4
HOH
 7.526
2.194
 HA
HG
 HO5
O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 SER A:78 A:100 7.0 0.061 E -139.1 115.3 7.0 0.061 0.0
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 SER B:82 B:78 19.0 NA E -142.3 104.2 19.0 NA NA
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 SER D:78 D:78 8.0 0.07 E -138.1 121.0 8.0 0.07 0.0 HOH
 3.117
 OG
 O
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 SER B:78 B:78 4.0 0.035 165.9 79.0 4.0 0.035 0.0
SER D:78 D:78 3.0 0.026 E 174.8 115.7 3.0 0.026 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 SER A:100 A:100 4.0 0.035 E -144.7 115.9