Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr5 | 158750143 | . | C | A | CCDS4346.1:NM_002187.2:c.283Gag>Tag_NP_002178.2:p.95E>* | Homo sapiens interleukin 12B (IL12B), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
4grw | 2 | P29460 | 100.0 | 0.0 |
X-RAY |
2014-02-19 | GLU | B:95 | B:73 | 126.0 | 0.663 | E | -135.7 | 144.1 | 126.0 | 0.663 | 0.0 |
HOH |
3.441 |
CA |
O |
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GLU | D:95 | D:73 | 131.0 | 0.689 | E | -123.3 | 148.6 | NA | NA | NA | |||||||||||||
5mxa | 2 | P29460 | 100.0 | 0.0 |
X-RAY |
2017-12-20 | GLU | B:95 | A:95 | 97.0 | 0.511 | E | -92.8 | 114.8 | 97.0 | 0.511 | 0.0 |
HOH |
3.105 |
HA |
O |
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5mzv | 1 | P29460 | 100.0 | 0.0 |
X-RAY |
2018-01-03 | GLU | A:95 | A:95 | 137.0 | 0.721 | E | -121.7 | 161.6 | 137.0 | 0.721 | 0.0 |
HOH |
4.585 |
H |
O |
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5njd | 1 | P29460 | 100.0 | 0.0 |
X-RAY |
2018-01-03 | GLU | A:95 | A:95 | 140.0 | 0.737 | E | -65.9 | 140.8 | 140.0 | 0.737 | 0.0 | ||||||
GLU | C:95 | C:95 | 145.0 | 0.763 | E | -73.4 | 150.1 | NA | NA | NA | |||||||||||||
GLU | E:95 | E:95 | 143.0 | 0.753 | E | -81.1 | 152.0 | NA | NA | NA | |||||||||||||
GLU | G:95 | G:95 | 142.0 | 0.747 | E | -83.9 | 140.1 | NA | NA | NA | |||||||||||||
GLU | I:95 | I:95 | 140.0 | 0.737 | E | -87.0 | 149.3 | NA | NA | NA | |||||||||||||
GLU | K:95 | K:95 | 137.0 | 0.721 | E | -85.5 | 133.9 | NA | NA | NA | |||||||||||||
6wdq | 1 | P29460 | 100.0 | 0.0 |
X-RAY |
2021-02-24 | GLU | A:75 | A:95 | 54.0 | NA | E | -116.7 | 133.0 | 54.0 | NA | NA | ||||||
3duh | 1 | P29460 | 99.35 | 0.0 |
X-RAY |
2008-08-19 | GLU | A:75 | A:73 | 132.0 | 0.695 | E | -104.3 | 137.6 | 132.0 | 0.695 | 0.0 |
HOH |
3.857 |
C |
O |
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GLU | B:75 | B:73 | 131.0 | 0.689 | E | -110.2 | 137.3 | NA | NA | NA | |||||||||||||
1f42 | 1 | P29460 | 100.0 | 0.0 |
X-RAY |
2001-06-13 | GLU | A:73 | A:73 | 139.0 | 0.732 | E | -82.5 | 152.0 | 139.0 | 0.732 | 0.0 |
HOH |
3.202 |
N |
O |
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1f45 | 1 | P29460 | 100.0 | 0.0 |
X-RAY |
2001-06-20 | GLU | A:73 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
3hmx | 1 | P29460 | 100.0 | 0.0 |
X-RAY |
2010-06-09 | GLU | A:73 | A:73 | 159.0 | 0.837 | S | -77.7 | 145.3 | 159.0 | 0.837 | 0.0 | ||||||
3qwr | 1 | P29460 | 100.0 | 0.0 |
X-RAY |
2012-02-01 | GLU | A:73 | A:73 | 136.0 | 0.716 | E | -112.4 | 146.0 | 136.0 | 0.716 | 0.0 | ||||||
5mj3 | 1 | P29460 | 100.0 | 0.0 |
X-RAY |
2017-01-11 | GLU | A:73 | A:95 | 145.0 | 0.763 | E | -92.6 | 144.5 | 145.0 | 0.763 | 0.0 |
HOH |
4.488 |
H |
O |
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5mj4 | 1 | P29460 | 100.0 | 0.0 |
X-RAY |
2017-01-11 | GLU | A:73 | A:95 | 140.0 | 0.737 | E | -92.5 | 144.5 | 140.0 | 0.737 | 0.0 | ||||||
6uib | 2 | P29460 | 100.0 | 0.0 |
X-RAY |
2020-07-15 | GLU | B:77 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
3d85 | 4 | P29460 | 99.67 | 0.0 |
X-RAY |
2008-09-02 | GLU | D:73 | D:73 | 134.0 | 0.705 | E | -116.0 | 154.2 | 134.0 | 0.705 | 0.0 |
HOH |
3.207 |
OE2 |
O |
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3d87 | 2 | P29460 | 99.67 | 0.0 |
X-RAY |
2008-09-02 | GLU | B:73 | B:73 | 126.0 | 0.663 | E | -100.5 | 147.7 | 126.0 | 0.663 | 0.0 | ||||||
GLU | D:73 | D:73 | 121.0 | 0.637 | -115.2 | 160.6 | 121.0 | 0.637 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p29460-f1 | 1 | P29460 | 100.0 | 0.0 | GLU | A:95 | A:95 | 141.0 | 0.742 | E | -92.7 | 138.7 |