Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158750247 . C A CCDS4346.1:NM_002187.2:c.179tGg>tTg_NP_002178.2:p.60W>L Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 TRP B:60 B:38 1.0 0.004 E -128.2 140.5 1.0 0.004 0.0 HOH
 4.461
 CD1
 O
TRP D:60 D:38 2.0 0.008 E -116.8 141.7 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 TRP B:60 A:60 1.0 0.004 E -122.0 143.6 1.0 0.004 0.0 HOH
 3.481
 HH2
 O
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 TRP A:60 A:60 2.0 0.008 E -129.6 144.6 2.0 0.008 0.0 HOH
 6.473
 N
 O
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 TRP A:60 A:60 0.0 0.0 E -113.7 154.1 0.0 0.0 0.0
TRP C:60 C:60 0.0 0.0 E -119.3 138.2 NA NA NA
TRP E:60 E:60 0.0 0.0 E -127.0 147.9 NA NA NA
TRP G:60 G:60 1.0 0.004 E -107.5 148.5 NA NA NA
TRP I:60 I:60 0.0 0.0 E -109.8 144.7 NA NA NA
TRP K:60 K:60 2.0 0.008 E -112.8 149.9 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 TRP A:40 A:60 11.0 0.043 E -124.3 134.2 11.0 0.043 0.0
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 TRP A:40 A:38 0.0 0.0 E -120.4 142.2 0.0 0.0 0.0 HOH
 5.247
 O
 O
TRP B:40 B:38 0.0 0.0 E -117.3 139.2 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 TRP A:38 A:38 1.0 0.004 E -128.5 135.0 1.0 0.004 0.0 HOH
 3.609
 CD1
 O
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 TRP A:38 A:38 0.0 0.0 E -137.7 112.4 0.0 0.0 0.0
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 TRP A:38 A:38 1.0 0.004 E -113.7 160.0 1.0 0.004 0.0 HOH
 7.290
 O
 O
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 TRP A:38 A:38 5.0 0.02 E -128.0 143.2 5.0 0.02 0.0
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 TRP A:38 A:60 1.0 0.004 E -123.4 144.3 1.0 0.004 0.0 HOH
 3.130
 HZ3
 O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 TRP A:38 A:60 2.0 0.008 E -123.0 144.6 2.0 0.008 0.0
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 TRP B:42 B:38 18.0 0.071 360.0 134.6 18.0 0.071 0.0
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 TRP D:38 D:38 1.0 0.004 E -128.9 143.8 1.0 0.004 0.0 HOH
 4.385
 CH2
 O
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 TRP B:38 B:38 0.0 0.0 E -123.2 136.8 0.0 0.0 0.0
TRP D:38 D:38 0.0 0.0 E -141.1 149.1 0.0 0.0 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 TRP A:60 A:60 0.0 0.0 E -116.8 143.8