Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158750329 . C A CCDS4346.1:NM_002187.2:c.97Gta>Tta_NP_002178.2:p.33V>L Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 VAL B:33 B:11 1.0 0.006 E -110.8 124.0 1.0 0.006 0.0 NAG
NAG
BMA
HOH
 6.559
8.825
9.978
3.408
 C
C
CA
CA
 O6
N2
O2
O
VAL D:33 D:11 0.0 0.0 E -108.8 123.6 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 VAL B:33 A:33 0.0 0.0 E -115.1 122.5 0.0 0.0 0.0 NAG
NAG
BMA
MAN
HOH
 6.612
7.643
8.916
9.852
7.129
 C
HA
HA
HA
O
 HO6
H3
HO2
O6
O
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 VAL A:33 A:33 0.0 0.0 E -108.9 131.1 0.0 0.0 0.0 NAG
NAG
BMA
MAN
MAN
HOH
 6.540
7.540
8.843
9.131
8.429
5.813
 O
HA
HA
HA
HG13
HG12
 O6
H3
O2
H62
HO6
O
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 VAL A:33 A:33 3.0 0.019 E -115.7 119.9 3.0 0.019 0.0 NAG
NAG
 6.553
8.974
 C
C
 O6
C1
VAL C:33 C:33 3.0 0.019 E -119.9 123.6 NA NA NA
VAL E:33 E:33 4.0 0.026 E -121.4 125.2 NA NA NA
VAL G:33 G:33 3.0 0.019 E -118.8 122.3 NA NA NA
VAL I:33 I:33 3.0 0.019 E -127.9 121.2 NA NA NA
VAL K:33 K:33 2.0 0.013 E -121.5 120.4 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 VAL A:13 A:33 4.0 0.026 E -115.3 126.1 4.0 0.026 0.0 NAG
 5.987
 C
 O6
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 VAL A:13 A:11 1.0 0.006 E -104.2 118.4 1.0 0.006 0.0 NAG
HOH
 6.390
8.226
 C
C
 O6
O
VAL B:13 B:11 2.0 0.013 E -94.5 114.5 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 VAL A:11 A:11 0.0 0.0 E -117.6 123.6 0.0 0.0 0.0 NAG
NAG
MAN
HOH
 6.833
8.936
9.804
3.713
 C
C
CA
CA
 O6
N2
O2
O
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 VAL A:11 A:11 0.0 0.0 E -122.6 115.2 0.0 0.0 0.0 NAG
NAG
HOH
 7.107
9.144
2.951
 C
C
CA
 O6
N2
O
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 VAL A:11 A:11 0.0 0.0 E -119.5 135.2 0.0 0.0 0.0 NAG
NAG
BMA
HOH
 7.131
8.495
9.410
7.046
 C
C
CA
O
 O6
N2
O2
O
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 VAL A:11 A:11 11.0 0.071 -80.6 -52.8 11.0 0.071 0.0 NAG
NAG
BMA
 6.896
7.569
8.921
 C
O
O
 O6
N2
O6
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 VAL A:11 A:33 2.0 0.013 E -109.8 114.9 2.0 0.013 0.0 NAG
NAG
BMA
PGE
HOH
 6.443
7.705
8.682
7.042
2.682
 C
HA
HA
C
HG13
 HO6
H3
HO2
O1
O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 VAL A:11 A:33 3.0 0.019 E -109.7 115.2 3.0 0.019 0.0 NAG
NAG
 6.488
8.016
 C
HA
 HO6
H3
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 VAL B:15 B:11 0.0 0.0 E -99.1 116.3 0.0 0.0 0.0 NAG
NAG
 7.143
9.173
 C
C
 O6
N2
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 VAL D:11 D:11 0.0 0.0 E -105.4 115.2 0.0 0.0 0.0 HOH
 5.828
 CA
 O
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 VAL B:11 B:11 0.0 0.0 E -113.3 122.3 0.0 0.0 0.0
VAL D:11 D:11 1.0 0.006 E -127.9 114.2 1.0 0.006 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 VAL A:33 A:33 0.0 0.0 E -103.3 120.3