Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr5 | 226049 | . | C | A | CCDS3853.1:NM_004168.2:c.508Cag>Aag_NP_004159.2:p.170Q>K | Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6vax | 1 | P31040 | 100.0 | 0.0 |
X-RAY |
2020-08-26 | GLN | A:138 | A:170 | 1.0 | 0.006 | E | -128.0 | 130.5 | 1.0 | 0.006 | 0.0 | ||||||
| GLN | C:138 | C:170 | 1.0 | 0.006 | E | -124.0 | 133.8 | NA | NA | NA | |||||||||||||
| 4ytp | 1 | Q0QF01 | 94.58 | 0.0 |
X-RAY |
2015-08-05 | GLN | A:170 | A:128 | 0.0 | 0.0 | E | -96.9 | 154.6 | 0.0 | 0.0 | 0.0 |
HOH |
7.550 |
N |
O |
||
| 4yxd | 1 | Q0QF01 | 94.58 | 0.0 |
X-RAY |
2016-03-02 | GLN | A:170 | A:128 | 0.0 | 0.0 | E | -111.5 | 157.7 | 0.0 | 0.0 | 0.0 | ||||||
| 1zoy | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2005-07-12 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -123.5 | 162.5 | 0.0 | 0.0 | 0.0 |
HOH |
3.112 |
OE1 |
O |
||
| 1zp0 | 1 | ? | 96.3 | 0.0 |
X-RAY |
2005-07-12 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -120.0 | 163.9 | 0.0 | 0.0 | 0.0 | ||||||
| 3abv | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -109.6 | 144.9 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae1 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -125.8 | 152.9 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae2 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -112.2 | 145.0 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae3 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -103.4 | 151.4 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae4 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 2.0 | 0.011 | E | -110.8 | 146.5 | 2.0 | 0.011 | 0.0 | ||||||
| 3ae5 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -97.1 | 161.7 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae6 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -104.5 | 145.1 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae7 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -104.9 | 153.1 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae8 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 1.0 | 0.006 | E | -107.2 | 154.5 | 1.0 | 0.006 | 0.0 | ||||||
| 3ae9 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | -99.9 | 157.3 | 0.0 | 0.0 | 0.0 | |||||||
| 3aea | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -104.7 | 155.3 | 0.0 | 0.0 | 0.0 | ||||||
| 3aeb | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -110.3 | 156.7 | 0.0 | 0.0 | 0.0 | ||||||
| 3aec | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -103.9 | 139.9 | 0.0 | 0.0 | 0.0 | ||||||
| 3aed | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -110.3 | 158.3 | 0.0 | 0.0 | 0.0 | ||||||
| 3aee | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -109.8 | 143.6 | 0.0 | 0.0 | 0.0 | ||||||
| 3aef | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -124.5 | 154.6 | 0.0 | 0.0 | 0.0 | ||||||
| 3aeg | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -126.1 | 143.3 | 0.0 | 0.0 | 0.0 | ||||||
| 3sfd | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-09-07 | GLN | A:128 | A:128 | 0.0 | 0.0 | E | -115.0 | 158.5 | 0.0 | 0.0 | 0.0 |
HOH |
2.782 |
NE2 |
O |
||
| 3sfe | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-09-07 | GLN | A:128 | A:128 | 2.0 | 0.011 | E | -123.0 | 151.9 | 2.0 | 0.011 | 0.0 |
HOH |
3.329 |
O |
O |
||
| 1yq3 | 1 | Q9YHT1 | 91.79 | 0.0 |
X-RAY |
2005-12-20 | GLN | A:127 | A:127 | 2.0 | 0.011 | E | -124.0 | 143.1 | 2.0 | 0.011 | 0.0 |
HOH |
2.673 |
O |
O |
||
| 1yq4 | 1 | 50736125 | 91.79 | 0.0 |
X-RAY |
2005-12-20 | GLN | A:127 | A:127 | 0.0 | 0.0 | E | -125.4 | 139.8 | 0.0 | 0.0 | 0.0 |
HOH |
2.950 |
NE2 |
O |
||
| 2fbw | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2005-12-20 | GLN | A:127 | A:127 | 2.0 | 0.011 | E | -120.7 | 141.3 | 2.0 | 0.011 | 0.0 |
UNL UNL UNL UNL UNL HOH |
7.645 9.749 8.463 9.506 9.838 2.766 |
OE1 O N N OE1 O |
C2 O O O O O |
||
| GLN | E:127 | N:127 | 2.0 | 0.011 | E | -117.2 | 140.9 | NA | NA | NA | |||||||||||||
| 2h88 | 1 | Q9YHT1 | 91.79 | 0.0 |
X-RAY |
2006-06-20 | GLN | A:127 | A:127 | 2.0 | 0.011 | E | -126.4 | 136.8 | 2.0 | 0.011 | 0.0 |
HOH |
2.644 |
O |
O |
||
| GLN | E:127 | N:127 | 1.0 | 0.006 | E | -125.4 | 136.2 | NA | NA | NA | |||||||||||||
| 2h89 | 1 | Q9YHT1 | 91.79 | 0.0 |
X-RAY |
2006-06-20 | GLN | A:127 | A:127 | 2.0 | 0.011 | E | -129.1 | 140.5 | 2.0 | 0.011 | 0.0 |
HOH |
2.751 |
NE2 |
O |
||
| 2wqy | 1 | Q9YHT1 | 91.79 | 0.0 |
X-RAY |
2010-08-25 | GLN | A:127 | A:127 | 2.0 | 0.011 | E | -120.8 | 138.2 | 2.0 | 0.011 | 0.0 |
HOH |
2.595 |
O |
O |
||
| GLN | E:127 | N:127 | 2.0 | 0.011 | E | -118.6 | 139.3 | NA | NA | NA | |||||||||||||
| 6myo | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2019-11-06 | GLN | A:127 | A:127 | 2.0 | 0.011 | E | -131.4 | 142.9 | 2.0 | 0.011 | 0.0 |
UNL UNL HOH |
6.856 9.798 3.002 |
OE1 OE1 O |
O O O |
||
| 6myp | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2019-11-06 | GLN | A:127 | A:127 | 2.0 | 0.011 | E | -129.5 | 137.3 | 2.0 | 0.011 | 0.0 |
UNL HOH |
9.202 2.328 |
N O |
N1 O |
||
| 6myq | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2019-11-06 | GLN | A:127 | A:127 | 1.0 | 0.006 | E | -128.5 | 139.6 | 1.0 | 0.006 | 0.0 |
HOH |
2.766 |
O |
O |
||
| 6myr | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2019-10-16 | GLN | A:127 | A:127 | 2.0 | 0.011 | E | -129.3 | 137.7 | 2.0 | 0.011 | 0.0 |
HOH |
3.065 |
OE1 |
O |
||
| 6mys | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2019-11-06 | GLN | A:127 | A:127 | 2.0 | 0.011 | E | -127.4 | 129.9 | 2.0 | 0.011 | 0.0 |
HOH |
3.043 |
NE2 |
O |
||
| 6myt | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2019-11-06 | GLN | A:127 | A:127 | 1.0 | 0.006 | E | -129.9 | 139.6 | 1.0 | 0.006 | 0.0 |
UNL UNL HOH |
5.379 8.381 2.673 |
O O O |
O O O |
||
| 6myu | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2019-11-06 | GLN | A:127 | A:127 | 1.0 | 0.006 | E | -128.1 | 141.3 | 1.0 | 0.006 | 0.0 |
UNL HOH |
7.919 2.468 |
OE1 O |
O O |
||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p31040-f1 | 1 | P31040 | 100.0 | 0.0 | GLN | A:170 | A:170 | 1.0 | 0.006 | E | -124.5 | 137.3 | |