Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 226091 . G A CCDS3853.1:NM_004168.2:c.550Ggg>Agg_NP_004159.2:p.184G>R Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6vax 1 P31040 100.0 0.0 X-RAY
 2020-08-26 GLY A:152 A:184 48.0 0.64 97.1 117.6 48.0 0.64 0.0
GLY C:152 C:184 42.0 0.56 107.8 -179.1 NA NA NA
4ytp 1 Q0QF01 94.58 0.0 X-RAY
 2015-08-05 GLY A:184 A:142 41.0 0.547 78.1 -158.0 41.0 0.547 0.0
4yxd 1 Q0QF01 94.58 0.0 X-RAY
 2016-03-02 GLY A:184 A:142 54.0 0.72 83.2 -169.2 54.0 0.72 0.0
1zoy 1 Q0QF01 96.3 0.0 X-RAY
 2005-07-12 GLY A:142 A:142 36.0 0.48 E 100.2 175.5 36.0 0.48 0.0 HOH
 4.116
 C
 O
1zp0 1 ? 96.3 0.0 X-RAY
 2005-07-12 GLY A:142 A:142 35.0 0.467 E 101.1 178.3 35.0 0.467 0.0
3abv 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 45.0 0.6 82.9 -170.1 45.0 0.6 0.0
3ae1 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 41.0 0.547 79.2 -171.5 41.0 0.547 0.0
3ae2 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 43.0 0.573 93.0 -155.1 43.0 0.573 0.0
3ae3 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 54.0 0.72 S 70.9 -144.5 54.0 0.72 0.0
3ae4 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 40.0 0.533 97.0 169.1 40.0 0.533 0.0
3ae5 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 50.0 0.667 72.8 -158.0 50.0 0.667 0.0
3ae6 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 58.0 0.773 S 79.5 -167.1 58.0 0.773 0.0
3ae7 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 56.0 0.747 S 84.4 -133.9 56.0 0.747 0.0
3ae8 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 35.0 0.467 E 93.3 -158.0 35.0 0.467 0.0
3ae9 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 51.0 0.68 76.1 -144.7 51.0 0.68 0.0
3aea 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 45.0 0.6 79.0 -136.6 45.0 0.6 0.0
3aeb 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 40.0 0.533 77.2 -164.8 40.0 0.533 0.0
3aec 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 42.0 0.56 170.1 -134.1 42.0 0.56 0.0
3aed 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 47.0 0.627 84.9 -140.9 47.0 0.627 0.0
3aee 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 52.0 0.693 75.1 -161.3 52.0 0.693 0.0
3aef 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 45.0 0.6 73.9 -168.0 45.0 0.6 0.0
3aeg 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:142 A:142 48.0 0.64 72.2 -157.7 48.0 0.64 0.0
3sfd 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 GLY A:142 A:142 39.0 0.52 65.7 -162.7 39.0 0.52 0.0 HOH
 3.943
 C
 O
3sfe 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 GLY A:142 A:142 40.0 0.533 87.0 -178.3 40.0 0.533 0.0 HOH
 6.356
 C
 O
1yq3 1 Q9YHT1 91.79 0.0 X-RAY
 2005-12-20 GLY A:141 A:141 44.0 0.587 93.4 173.1 44.0 0.587 0.0 UNL
HOH
 7.842
2.590
 O
N
 O1
O
1yq4 1 50736125 91.79 0.0 X-RAY
 2005-12-20 GLY A:141 A:141 43.0 0.573 87.4 176.6 43.0 0.573 0.0 HOH
 6.214
 C
 O
2fbw 1 F1NPJ4 91.79 0.0 X-RAY
 2005-12-20 GLY A:141 A:141 45.0 0.6 81.2 -172.5 45.0 0.6 0.0 UNL
UNL
UNL
UNL
UNL
HOH
 4.951
7.416
4.411
9.772
8.613
3.449
 C
N
C
N
N
CA
 O8
N3
O
O
O
O
GLY E:141 N:141 46.0 0.613 80.8 -171.7 NA NA NA
2h88 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 GLY A:141 A:141 46.0 0.613 98.0 172.9 46.0 0.613 0.0 HOH
 2.365
 N
 O
GLY E:141 N:141 46.0 0.613 97.0 172.7 NA NA NA
2h89 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 GLY A:141 A:141 40.0 0.533 81.2 175.0 40.0 0.533 0.0 UNL
HOH
 8.018
3.027
 N
N
 O1
O
2wqy 1 Q9YHT1 91.79 0.0 X-RAY
 2010-08-25 GLY A:141 A:141 47.0 0.627 88.1 176.0 47.0 0.627 0.0 HOH
 2.691
 N
 O
GLY E:141 N:141 45.0 0.6 88.1 175.6 NA NA NA
6myo 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLY A:141 A:141 45.0 0.6 94.5 -177.6 45.0 0.6 0.0 HOH
 2.706
 N
 O
6myp 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLY A:141 A:141 46.0 0.613 87.7 -175.3 46.0 0.613 0.0 UNL
HOH
 6.914
2.906
 O
N
 C
O
6myq 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLY A:141 A:141 47.0 0.627 93.3 178.5 47.0 0.627 0.0 UNL
HOH
 7.342
3.309
 N
CA
 O2
O
6myr 1 F1NPJ4 91.79 0.0 X-RAY
 2019-10-16 GLY A:141 A:141 46.0 0.613 90.1 -173.9 46.0 0.613 0.0 HOH
 8.513
 O
 O
6mys 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLY A:141 A:141 45.0 0.6 85.9 -178.1 45.0 0.6 0.0 HOH
 8.248
 O
 O
6myt 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLY A:141 A:141 44.0 0.587 109.1 -178.2 44.0 0.587 0.0 HOH
 5.551
 C
 O
6myu 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLY A:141 A:141 43.0 0.573 94.5 178.7 43.0 0.573 0.0 UNL
HOH
 7.746
3.394
 O
CA
 O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p31040-f1 1 P31040 100.0 0.0 GLY A:184 A:184 49.0 0.653 85.0 -172.8