Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 228384 . G A CCDS3853.1:NM_004168.2:c.706Gca>Aca_NP_004159.2:p.236A>T Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6vax 1 P31040 100.0 0.0 X-RAY
 2020-08-26 ALA A:204 A:236 0.0 0.0 E -128.8 164.1 0.0 0.0 0.0 FAD
HOH
 6.454
8.398
 CB
CA
 N1A
O
ALA C:204 C:236 0.0 0.0 E -132.7 166.9 NA NA NA
4ytp 1 Q0QF01 94.58 0.0 X-RAY
 2015-08-05 ALA A:236 A:194 0.0 0.0 E -152.2 149.4 0.0 0.0 0.0 FAD
 6.294
 CB
 N1A
4yxd 1 Q0QF01 94.58 0.0 X-RAY
 2016-03-02 ALA A:236 A:194 0.0 0.0 E -136.2 151.7 0.0 0.0 0.0 FAD
 6.290
 CB
 N1A
1zoy 1 Q0QF01 96.3 0.0 X-RAY
 2005-07-12 ALA A:194 A:194 0.0 0.0 E -135.6 164.0 0.0 0.0 0.0 FAD
HOH
 6.428
6.625
 CB
O
 N1A
O
1zp0 1 ? 96.3 0.0 X-RAY
 2005-07-12 ALA A:194 A:194 0.0 0.0 E -130.8 167.1 0.0 0.0 0.0 FAD
 6.344
 CB
 N1A
3abv 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -143.2 148.7 0.0 0.0 0.0 FAD
 6.648
 CB
 N1A
3ae1 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -141.7 147.8 0.0 0.0 0.0 FAD
 6.212
 CB
 N1A
3ae2 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -132.9 144.6 0.0 0.0 0.0 FAD
 6.735
 CB
 N1A
3ae3 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -141.6 143.8 0.0 0.0 0.0 FAD
 6.308
 CB
 N1A
3ae4 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -136.8 157.0 0.0 0.0 0.0 FAD
 5.936
 CB
 N1A
3ae5 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -141.0 152.7 0.0 0.0 0.0 FAD
 6.270
 CB
 N1A
3ae6 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -136.8 149.2 0.0 0.0 0.0 FAD
 6.227
 CB
 N1A
3ae7 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -138.1 154.3 0.0 0.0 0.0 FAD
 6.027
 CB
 N1A
3ae8 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -129.7 154.2 0.0 0.0 0.0 FAD
 6.390
 CB
 N1A
3ae9 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -132.6 140.6 0.0 0.0 0.0 FAD
 7.545
 CB
 N7A
3aea 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -134.9 147.1 0.0 0.0 0.0 FAD
 6.490
 CB
 N1A
3aeb 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -141.5 153.9 0.0 0.0 0.0 FAD
 6.598
 CB
 N1A
3aec 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -116.1 149.9 0.0 0.0 0.0 FAD
 6.071
 CB
 N1A
3aed 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -133.0 143.5 0.0 0.0 0.0 FAD
 6.314
 CB
 N1A
3aee 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -129.0 141.3 0.0 0.0 0.0 FAD
 6.729
 CB
 N1A
3aef 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -136.8 143.2 0.0 0.0 0.0 FAD
 6.392
 CB
 N1A
3aeg 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:194 A:194 0.0 0.0 E -124.5 133.7 0.0 0.0 0.0 FAD
 6.302
 CB
 N1A
3sfd 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 ALA A:194 A:194 0.0 0.0 E -132.3 158.3 0.0 0.0 0.0 FAD
HOH
 6.291
8.515
 CB
CA
 N1A
O
3sfe 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 ALA A:194 A:194 0.0 0.0 E -139.0 152.3 0.0 0.0 0.0 FAD
 6.314
 CB
 N1A
1yq3 1 Q9YHT1 91.79 0.0 X-RAY
 2005-12-20 ALA A:193 A:193 0.0 0.0 E -140.6 160.7 0.0 0.0 0.0 FAD
HOH
 6.388
7.701
 CB
CA
 N1A
O
1yq4 1 50736125 91.79 0.0 X-RAY
 2005-12-20 ALA A:193 A:193 0.0 0.0 E -150.6 165.6 0.0 0.0 0.0 FAD
HOH
 6.176
7.648
 CB
CA
 N1A
O
2fbw 1 F1NPJ4 91.79 0.0 X-RAY
 2005-12-20 ALA A:193 A:193 0.0 0.0 E -153.2 157.0 0.0 0.0 0.0 FAD
UNL
UNL
UNL
HOH
 6.330
8.231
8.359
8.700
8.702
 CB
CA
CA
O
CA
 N1A
N2
O
O
O
ALA E:193 N:193 0.0 0.0 E -149.0 157.8 NA NA NA
2h88 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 ALA A:193 A:193 0.0 0.0 E -141.8 159.1 0.0 0.0 0.0 FAD
HOH
 6.504
8.213
 CB
CA
 N1A
O
ALA E:193 N:193 0.0 0.0 E -140.8 159.4 NA NA NA
2h89 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 ALA A:193 A:193 0.0 0.0 E -157.3 167.6 0.0 0.0 0.0 FAD
HOH
 6.218
8.159
 CB
CA
 N1A
O
2wqy 1 Q9YHT1 91.79 0.0 X-RAY
 2010-08-25 ALA A:193 A:193 0.0 0.0 E -147.0 164.2 0.0 0.0 0.0 FAD
HOH
 6.253
8.170
 CB
CA
 N1A
O
ALA E:193 N:193 0.0 0.0 E -145.6 164.9 NA NA NA
6myo 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ALA A:193 A:193 0.0 0.0 E -147.3 163.7 0.0 0.0 0.0 FAD
HOH
 6.394
7.906
 CB
CA
 N1A
O
6myp 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ALA A:193 A:193 0.0 0.0 E -145.3 166.6 0.0 0.0 0.0 FAD
HOH
 6.082
8.311
 CB
CA
 N1A
O
6myq 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ALA A:193 A:193 0.0 0.0 E -147.5 163.3 0.0 0.0 0.0 FAD
HOH
 6.201
8.237
 CB
CA
 N1A
O
6myr 1 F1NPJ4 91.79 0.0 X-RAY
 2019-10-16 ALA A:193 A:193 0.0 0.0 E -137.6 157.1 0.0 0.0 0.0 FAD
HOH
 6.150
8.254
 CB
CA
 N1A
O
6mys 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ALA A:193 A:193 0.0 0.0 E -133.7 171.1 0.0 0.0 0.0 FAD
 6.149
 CB
 N1A
6myt 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ALA A:193 A:193 0.0 0.0 E -143.7 165.7 0.0 0.0 0.0 FAD
HOH
 6.196
8.334
 CB
C
 N1A
O
6myu 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ALA A:193 A:193 0.0 0.0 E -148.6 163.9 0.0 0.0 0.0 FAD
HOH
 6.221
8.062
 CB
CA
 N1A
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p31040-f1 1 P31040 100.0 0.0 ALA A:236 A:236 0.0 0.0 E -140.8 153.6