Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 231046 . G A CCDS3853.1:NM_004168.2:c.826Ggc>Agc_NP_004159.2:p.276G>S Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6vax 1 P31040 100.0 0.0 X-RAY
 2020-08-26 GLY A:244 A:276 0.0 0.0 H -64.5 -33.7 0.0 0.0 0.0 FAD
HOH
 5.183
7.273
 N
O
 N7A
O
GLY C:244 C:276 0.0 0.0 H -62.5 -37.3 NA NA NA
4ytp 1 Q0QF01 94.58 0.0 X-RAY
 2015-08-05 GLY A:276 A:234 0.0 0.0 H -69.6 -43.1 0.0 0.0 0.0 FAD
 5.316
 N
 N7A
4yxd 1 Q0QF01 94.58 0.0 X-RAY
 2016-03-02 GLY A:276 A:234 0.0 0.0 H -80.6 -34.7 0.0 0.0 0.0 FAD
 5.292
 N
 N7A
1zoy 1 Q0QF01 96.3 0.0 X-RAY
 2005-07-12 GLY A:234 A:234 0.0 0.0 H -75.1 -41.0 0.0 0.0 0.0 FAD
HOH
 5.260
2.999
 N
N
 N7A
O
1zp0 1 ? 96.3 0.0 X-RAY
 2005-07-12 GLY A:234 A:234 0.0 0.0 H -75.4 -41.2 0.0 0.0 0.0 FAD
 5.135
 N
 N7A
3abv 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -73.4 -33.8 0.0 0.0 0.0 FAD
 5.255
 N
 N7A
3ae1 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -78.5 -36.8 0.0 0.0 0.0 FAD
 5.389
 N
 N7A
3ae2 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -73.9 -39.3 0.0 0.0 0.0 FAD
 5.203
 N
 N7A
3ae3 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -66.4 -40.5 0.0 0.0 0.0 FAD
 5.462
 N
 N7A
3ae4 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -69.4 -39.2 0.0 0.0 0.0 FAD
 5.009
 N
 N7A
3ae5 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -67.1 -32.0 0.0 0.0 0.0 FAD
 5.609
 N
 N7A
3ae6 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -69.6 -29.2 0.0 0.0 0.0 FAD
 5.542
 N
 N7A
3ae7 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -62.5 -33.5 0.0 0.0 0.0 FAD
 5.477
 N
 N7A
3ae8 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 1.0 0.013 T -73.4 -25.8 1.0 0.013 0.0 FAD
 5.530
 N
 N7A
3ae9 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -61.8 -33.1 0.0 0.0 0.0 FAD
 5.007
 N
 N1A
3aea 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -66.8 -35.3 0.0 0.0 0.0 FAD
 5.598
 N
 N7A
3aeb 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -74.0 -29.9 0.0 0.0 0.0 FAD
 5.151
 N
 N7A
3aec 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -70.6 -29.6 0.0 0.0 0.0 FAD
 5.530
 N
 N7A
3aed 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -63.7 -34.7 0.0 0.0 0.0 FAD
 5.402
 N
 N7A
3aee 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -77.7 -35.6 0.0 0.0 0.0 FAD
 5.511
 N
 N7A
3aef 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -84.8 -33.1 0.0 0.0 0.0 FAD
 5.248
 N
 N7A
3aeg 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLY A:234 A:234 0.0 0.0 H -69.2 -30.2 0.0 0.0 0.0 FAD
 5.181
 N
 N7A
3sfd 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 GLY A:234 A:234 0.0 0.0 H -77.8 -47.3 0.0 0.0 0.0 FAD
HOH
 5.229
3.367
 N
N
 N7A
O
3sfe 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 GLY A:234 A:234 0.0 0.0 H -84.7 -47.0 0.0 0.0 0.0 FAD
 5.432
 N
 N7A
1yq3 1 Q9YHT1 91.79 0.0 X-RAY
 2005-12-20 GLY A:233 A:233 0.0 0.0 H -72.8 -35.5 0.0 0.0 0.0 FAD
HOH
 4.973
3.214
 N
N
 N7A
O
1yq4 1 50736125 91.79 0.0 X-RAY
 2005-12-20 GLY A:233 A:233 0.0 0.0 H -79.0 -37.0 0.0 0.0 0.0 FAD
HOH
 5.167
3.519
 N
N
 N7A
O
2fbw 1 F1NPJ4 91.79 0.0 X-RAY
 2005-12-20 GLY A:233 A:233 0.0 0.0 H -74.5 -37.8 0.0 0.0 0.0 FAD
UNL
UNL
HOH
 5.204
5.473
9.739
3.187
 N
N
N
N
 N7A
N3
O
O
GLY E:233 N:233 0.0 0.0 H -74.6 -37.7 NA NA NA
2h88 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 GLY A:233 A:233 0.0 0.0 H -71.8 -31.4 0.0 0.0 0.0 FAD
HOH
 5.061
3.340
 N
N
 N7A
O
GLY E:233 N:233 0.0 0.0 H -75.3 -31.3 NA NA NA
2h89 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 GLY A:233 A:233 0.0 0.0 H -70.0 -33.6 0.0 0.0 0.0 FAD
HOH
 5.073
2.967
 N
N
 N7A
O
2wqy 1 Q9YHT1 91.79 0.0 X-RAY
 2010-08-25 GLY A:233 A:233 0.0 0.0 H -75.6 -37.9 0.0 0.0 0.0 FAD
HOH
 5.101
3.243
 N
N
 N7A
O
GLY E:233 N:233 0.0 0.0 H -76.3 -38.5 NA NA NA
6myo 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLY A:233 A:233 0.0 0.0 H -79.0 -27.1 0.0 0.0 0.0 FAD
HOH
 5.197
3.226
 N
N
 N7A
O
6myp 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLY A:233 A:233 0.0 0.0 H -72.2 -39.4 0.0 0.0 0.0 FAD
HOH
 5.108
3.476
 N
N
 N7A
O
6myq 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLY A:233 A:233 0.0 0.0 H -76.0 -37.5 0.0 0.0 0.0 FAD
HOH
 5.122
3.220
 N
N
 N7A
O
6myr 1 F1NPJ4 91.79 0.0 X-RAY
 2019-10-16 GLY A:233 A:233 1.0 0.013 H -78.3 -32.5 1.0 0.013 0.0 FAD
UNL
HOH
 5.045
8.362
3.140
 N
CA
N
 N7A
O
O
6mys 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLY A:233 A:233 0.0 0.0 H -69.6 -34.4 0.0 0.0 0.0 FAD
HOH
 4.968
3.189
 N
N
 N7A
O
6myt 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLY A:233 A:233 0.0 0.0 H -76.6 -26.5 0.0 0.0 0.0 FAD
UNL
HOH
 5.258
9.799
3.152
 N
N
N
 N7A
O
O
6myu 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLY A:233 A:233 0.0 0.0 H -71.2 -27.7 0.0 0.0 0.0 FAD
HOH
 5.140
3.394
 N
N
 N7A
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p31040-f1 1 P31040 100.0 0.0 GLY A:276 A:276 0.0 0.0 H -69.1 -36.9