Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr5 | 231082 | . | C | A | CCDS3853.1:NM_004168.2:c.862Cag>Aag_NP_004159.2:p.288Q>K | Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6vax | 1 | P31040 | 100.0 | 0.0 |
X-RAY |
2020-08-26 | GLN | A:256 | A:288 | 0.0 | 0.0 | E | -123.0 | 133.1 | 0.0 | 0.0 | 0.0 |
K HOH |
6.765 3.331 |
O C |
K O |
||
| GLN | C:256 | C:288 | 0.0 | 0.0 | E | -120.1 | 132.7 | NA | NA | NA | |||||||||||||
| 4ytp | 1 | Q0QF01 | 94.58 | 0.0 |
X-RAY |
2015-08-05 | GLN | A:288 | A:246 | 0.0 | 0.0 | E | -122.8 | 143.5 | 0.0 | 0.0 | 0.0 | ||||||
| 4yxd | 1 | Q0QF01 | 94.58 | 0.0 |
X-RAY |
2016-03-02 | GLN | A:288 | A:246 | 0.0 | 0.0 | E | -74.7 | 137.5 | 0.0 | 0.0 | 0.0 | ||||||
| 1zoy | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2005-07-12 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -114.7 | 145.9 | 0.0 | 0.0 | 0.0 |
HOH |
2.621 |
OE1 |
O |
||
| 1zp0 | 1 | ? | 96.3 | 0.0 |
X-RAY |
2005-07-12 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -110.3 | 145.5 | 0.0 | 0.0 | 0.0 | ||||||
| 3abv | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -125.2 | 143.1 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae1 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -129.5 | 143.2 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae2 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -131.0 | 145.2 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae3 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -101.8 | 143.6 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae4 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -115.9 | 138.8 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae5 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -94.3 | 144.8 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae6 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -97.2 | 138.2 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae7 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -96.5 | 136.9 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae8 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -99.9 | 142.3 | 0.0 | 0.0 | 0.0 | ||||||
| 3ae9 | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -96.5 | 139.4 | 0.0 | 0.0 | 0.0 | ||||||
| 3aea | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -111.7 | 139.5 | 0.0 | 0.0 | 0.0 | ||||||
| 3aeb | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -132.1 | 140.2 | 0.0 | 0.0 | 0.0 | ||||||
| 3aec | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -95.1 | 138.0 | 0.0 | 0.0 | 0.0 | ||||||
| 3aed | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -124.9 | 146.0 | 0.0 | 0.0 | 0.0 | ||||||
| 3aee | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -110.0 | 139.0 | 0.0 | 0.0 | 0.0 | ||||||
| 3aef | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -125.2 | 137.5 | 0.0 | 0.0 | 0.0 | ||||||
| 3aeg | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-02-09 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -103.7 | 142.8 | 0.0 | 0.0 | 0.0 | ||||||
| 3sfd | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-09-07 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -81.7 | 140.6 | 0.0 | 0.0 | 0.0 |
HOH |
3.352 |
C |
O |
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| 3sfe | 1 | Q0QF01 | 96.3 | 0.0 |
X-RAY |
2011-09-07 | GLN | A:246 | A:246 | 0.0 | 0.0 | E | -113.0 | 147.5 | 0.0 | 0.0 | 0.0 | ||||||
| 1yq3 | 1 | Q9YHT1 | 91.79 | 0.0 |
X-RAY |
2005-12-20 | GLN | A:245 | A:245 | 0.0 | 0.0 | E | -142.6 | 144.5 | 0.0 | 0.0 | 0.0 |
HOH |
3.189 |
C |
O |
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| 1yq4 | 1 | 50736125 | 91.79 | 0.0 |
X-RAY |
2005-12-20 | GLN | A:245 | A:245 | 0.0 | 0.0 | E | -119.6 | 155.6 | 0.0 | 0.0 | 0.0 |
HOH |
3.246 |
NE2 |
O |
||
| 2fbw | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2005-12-20 | GLN | A:245 | A:245 | 0.0 | 0.0 | E | -134.8 | 133.7 | 0.0 | 0.0 | 0.0 |
K HOH |
7.091 3.008 |
O NE2 |
K O |
||
| GLN | E:245 | N:245 | 0.0 | 0.0 | E | -136.3 | 131.5 | NA | NA | NA | |||||||||||||
| 2h88 | 1 | Q9YHT1 | 91.79 | 0.0 |
X-RAY |
2006-06-20 | GLN | A:245 | A:245 | 0.0 | 0.0 | E | -135.6 | 135.3 | 0.0 | 0.0 | 0.0 |
K HOH |
6.955 2.967 |
O NE2 |
K O |
||
| GLN | E:245 | N:245 | 0.0 | 0.0 | E | -134.9 | 135.1 | NA | NA | NA | |||||||||||||
| 2h89 | 1 | Q9YHT1 | 91.79 | 0.0 |
X-RAY |
2006-06-20 | GLN | A:245 | A:245 | 0.0 | 0.0 | E | -122.3 | 147.8 | 0.0 | 0.0 | 0.0 |
K HOH |
6.867 3.376 |
O C |
K O |
||
| 2wqy | 1 | Q9YHT1 | 91.79 | 0.0 |
X-RAY |
2010-08-25 | GLN | A:245 | A:245 | 0.0 | 0.0 | E | -134.6 | 137.4 | 0.0 | 0.0 | 0.0 |
K HOH |
7.027 3.061 |
O NE2 |
K O |
||
| GLN | E:245 | N:245 | 0.0 | 0.0 | E | -136.1 | 136.0 | NA | NA | NA | |||||||||||||
| 6myo | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2019-11-06 | GLN | A:245 | A:245 | 0.0 | 0.0 | E | -122.0 | 137.3 | 0.0 | 0.0 | 0.0 |
K HOH |
7.066 2.956 |
O NE2 |
K O |
||
| 6myp | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2019-11-06 | GLN | A:245 | A:245 | 0.0 | 0.0 | E | -122.6 | 133.4 | 0.0 | 0.0 | 0.0 |
K UNL UNL UNL HOH |
6.875 6.440 3.768 7.407 3.497 |
O NE2 C NE2 NE2 |
K N3 C2 N3 O |
||
| 6myq | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2019-11-06 | GLN | A:245 | A:245 | 0.0 | 0.0 | E | -129.2 | 135.9 | 0.0 | 0.0 | 0.0 |
K UNL HOH |
6.921 6.398 2.952 |
O NE2 NE2 |
K N3 O |
||
| 6myr | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2019-10-16 | GLN | A:245 | A:245 | 0.0 | 0.0 | E | -116.9 | 134.6 | 0.0 | 0.0 | 0.0 |
K UNL HOH |
6.983 6.850 2.916 |
O NE2 NE2 |
K N3 O |
||
| 6mys | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2019-11-06 | GLN | A:245 | A:245 | 0.0 | 0.0 | E | -118.2 | 129.0 | 0.0 | 0.0 | 0.0 |
K HOH |
6.875 6.290 |
O NE2 |
K O |
||
| 6myt | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2019-11-06 | GLN | A:245 | A:245 | 0.0 | 0.0 | E | -124.6 | 131.6 | 0.0 | 0.0 | 0.0 |
K UNL HOH |
6.776 6.791 5.936 |
O NE2 NE2 |
K N3 O |
||
| 6myu | 1 | F1NPJ4 | 91.79 | 0.0 |
X-RAY |
2019-11-06 | GLN | A:245 | A:245 | 0.0 | 0.0 | E | -129.5 | 136.0 | 0.0 | 0.0 | 0.0 |
K UNL HOH |
6.927 6.579 3.189 |
O NE2 NE2 |
K N3 O |
||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p31040-f1 | 1 | P31040 | 100.0 | 0.0 | GLN | A:288 | A:288 | 1.0 | 0.006 | E | -112.3 | 138.7 | |