Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 233651 . A C CCDS3853.1:NM_004168.2:c.955Att>Ctt_NP_004159.2:p.319I>L Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6vax 1 P31040 100.0 0.0 X-RAY
 2020-08-26 ILE A:287 A:319 13.0 0.074 E -125.3 141.0 13.0 0.074 0.0
ILE C:287 C:319 13.0 0.074 E -127.7 139.9 NA NA NA
4ytp 1 Q0QF01 94.58 0.0 X-RAY
 2015-08-05 ILE A:319 A:277 27.0 0.154 E -122.1 139.0 27.0 0.154 0.0
4yxd 1 Q0QF01 94.58 0.0 X-RAY
 2016-03-02 ILE A:319 A:277 32.0 0.183 E -112.8 139.2 32.0 0.183 0.0
1zoy 1 Q0QF01 96.3 0.0 X-RAY
 2005-07-12 ILE A:277 A:277 28.0 0.16 E -132.2 131.7 28.0 0.16 0.0 HOH
 6.340
 C
 O
1zp0 1 ? 96.3 0.0 X-RAY
 2005-07-12 ILE A:277 A:277 29.0 0.166 E -130.0 133.7 29.0 0.166 0.0
3abv 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 18.0 0.103 E -124.0 132.3 18.0 0.103 0.0
3ae1 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 19.0 0.109 E -137.1 139.1 19.0 0.109 0.0
3ae2 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 17.0 0.097 E -125.3 137.6 17.0 0.097 0.0
3ae3 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 22.0 0.126 E -117.4 132.8 22.0 0.126 0.0
3ae4 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 22.0 0.126 E -128.8 137.8 22.0 0.126 0.0
3ae5 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 33.0 0.189 E -122.5 136.8 33.0 0.189 0.0
3ae6 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 22.0 0.126 E -127.3 128.2 22.0 0.126 0.0
3ae7 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 32.0 0.183 E -130.3 136.9 32.0 0.183 0.0
3ae8 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 26.0 0.149 E -126.8 129.5 26.0 0.149 0.0
3ae9 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 25.0 0.143 E -121.2 130.8 25.0 0.143 0.0
3aea 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 21.0 0.12 B -116.1 131.9 21.0 0.12 0.0
3aeb 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 20.0 0.114 E -129.0 130.4 20.0 0.114 0.0
3aec 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 29.0 0.166 E -123.9 133.3 29.0 0.166 0.0
3aed 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 17.0 0.097 E -118.3 132.6 17.0 0.097 0.0
3aee 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 29.0 0.166 E -116.2 126.2 29.0 0.166 0.0
3aef 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 20.0 0.114 E -136.8 128.1 20.0 0.114 0.0
3aeg 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ILE A:277 A:277 16.0 0.091 E -123.4 136.2 16.0 0.091 0.0
3sfd 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 ILE A:277 A:277 29.0 0.166 E -127.0 133.1 29.0 0.166 0.0 HOH
 7.867
 CG1
 O
3sfe 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 ILE A:277 A:277 25.0 0.143 E -124.2 136.2 25.0 0.143 0.0
1yq3 1 Q9YHT1 91.79 0.0 X-RAY
 2005-12-20 ILE A:276 A:276 16.0 0.091 E -131.5 136.3 16.0 0.091 0.0 HOH
 4.131
 CD1
 O
1yq4 1 50736125 91.79 0.0 X-RAY
 2005-12-20 ILE A:276 A:276 21.0 0.12 E -136.6 133.7 21.0 0.12 0.0 HOH
 4.635
 N
 O
2fbw 1 F1NPJ4 91.79 0.0 X-RAY
 2005-12-20 ILE A:276 A:276 20.0 0.114 E -129.4 154.2 20.0 0.114 0.0 UNL
HOH
 7.119
3.454
 CG2
CD1
 O10
O
ILE E:276 N:276 22.0 0.126 E -131.5 155.2 NA NA NA
2h88 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 ILE A:276 A:276 22.0 0.126 E -135.8 153.2 22.0 0.126 0.0 HOH
 3.678
 CD1
 O
ILE E:276 N:276 20.0 0.114 E -136.5 155.4 NA NA NA
2h89 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 ILE A:276 A:276 26.0 0.149 E -150.6 137.2 26.0 0.149 0.0 HOH
 5.108
 N
 O
2wqy 1 Q9YHT1 91.79 0.0 X-RAY
 2010-08-25 ILE A:276 A:276 18.0 0.103 E -130.7 154.9 18.0 0.103 0.0 UNL
UNL
HOH
 7.666
7.695
3.455
 CG2
CD1
CD1
 O2
C2
O
ILE E:276 N:276 20.0 0.114 E -131.1 156.0 NA NA NA
6myo 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ILE A:276 A:276 21.0 0.12 E -131.4 151.2 21.0 0.12 0.0 HOH
 4.911
 N
 O
6myp 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ILE A:276 A:276 21.0 0.12 E -130.6 152.4 21.0 0.12 0.0 HOH
 4.645
 N
 O
6myq 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ILE A:276 A:276 19.0 0.109 E -129.8 150.1 19.0 0.109 0.0 HOH
 3.030
 CD1
 O
6myr 1 F1NPJ4 91.79 0.0 X-RAY
 2019-10-16 ILE A:276 A:276 25.0 0.143 E -135.5 135.6 25.0 0.143 0.0
6mys 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ILE A:276 A:276 17.0 0.097 E -126.5 134.2 17.0 0.097 0.0
6myt 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ILE A:276 A:276 16.0 0.091 E -130.4 151.1 16.0 0.091 0.0 HOH
 4.585
 N
 O
6myu 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ILE A:276 A:276 20.0 0.114 E -127.9 153.8 20.0 0.114 0.0 HOH
 4.783
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p31040-f1 1 P31040 100.0 0.0 ILE A:319 A:319 18.0 0.103 E -127.8 144.2