Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 233660 . C A CCDS3853.1:NM_004168.2:c.964Caa>Aaa_NP_004159.2:p.322Q>K Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6vax 1 P31040 100.0 0.0 X-RAY
 2020-08-26 GLN A:290 A:322 117.0 0.65 T -126.8 20.7 117.0 0.65 0.0
GLN C:290 C:322 119.0 0.661 T -115.1 22.8 NA NA NA
4ytp 1 Q0QF01 94.58 0.0 X-RAY
 2015-08-05 GLN A:322 A:280 170.0 0.944 T -93.9 10.9 170.0 0.944 0.0
4yxd 1 Q0QF01 94.58 0.0 X-RAY
 2016-03-02 GLN A:322 A:280 165.0 0.917 T -114.0 15.5 165.0 0.917 0.0
1zoy 1 Q0QF01 96.3 0.0 X-RAY
 2005-07-12 GLN A:280 A:280 145.0 0.806 T -64.0 -13.6 145.0 0.806 0.0 HOH
 3.348
 N
 O
1zp0 1 ? 96.3 0.0 X-RAY
 2005-07-12 GLN A:280 A:280 145.0 0.806 T -60.5 -19.3 145.0 0.806 0.0
3abv 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 172.0 0.956 T -95.1 8.1 172.0 0.956 0.0
3ae1 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 149.0 0.828 T -74.7 -27.1 149.0 0.828 0.0
3ae2 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 151.0 0.839 T -100.3 -23.1 151.0 0.839 0.0
3ae3 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 174.0 0.967 S -73.5 -24.6 174.0 0.967 0.0
3ae4 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 153.0 0.85 T -99.6 6.9 153.0 0.85 0.0
3ae5 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 153.0 0.85 S -75.1 -27.9 153.0 0.85 0.0
3ae6 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 163.0 0.906 T -82.3 -35.0 163.0 0.906 0.0
3ae7 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 158.0 0.878 S -74.9 -33.6 158.0 0.878 0.0
3ae8 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 144.0 0.8 T -71.6 -29.2 144.0 0.8 0.0
3ae9 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 147.0 0.817 T -74.5 -28.1 147.0 0.817 0.0
3aea 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 154.0 0.856 S -72.8 -35.0 154.0 0.856 0.0
3aeb 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 170.0 0.944 T -88.7 -8.9 170.0 0.944 0.0
3aec 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 165.0 0.917 T -74.5 -22.6 165.0 0.917 0.0
3aed 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 173.0 0.961 S -103.4 -9.5 173.0 0.961 0.0
3aee 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 173.0 0.961 T -78.3 -27.3 173.0 0.961 0.0
3aef 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 138.0 0.767 T -77.0 -20.5 138.0 0.767 0.0
3aeg 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:280 A:280 130.0 0.722 S -74.7 -43.8 130.0 0.722 0.0
3sfd 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 GLN A:280 A:280 140.0 0.778 T -74.9 -17.3 140.0 0.778 0.0 HOH
 8.905
 O
 O
3sfe 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 GLN A:280 A:280 178.0 0.989 T -100.2 18.5 178.0 0.989 0.0 HOH
 6.977
 OE1
 O
1yq3 1 Q9YHT1 91.79 0.0 X-RAY
 2005-12-20 GLN A:279 A:279 149.0 0.828 T -105.5 6.8 149.0 0.828 0.0 HOH
 2.695
 OE1
 O
1yq4 1 50736125 91.79 0.0 X-RAY
 2005-12-20 GLN A:279 A:279 154.0 0.856 T -127.6 19.7 154.0 0.856 0.0 HOH
 6.572
 O
 O
2fbw 1 F1NPJ4 91.79 0.0 X-RAY
 2005-12-20 GLN A:279 A:279 144.0 0.8 T -90.8 5.1 144.0 0.8 0.0 UNL
HOH
 3.922
2.708
 OE1
NE2
 O
O
GLN E:279 N:279 145.0 0.806 T -89.5 4.1 NA NA NA
2h88 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 GLN A:279 A:279 145.0 0.806 T -92.8 4.1 145.0 0.806 0.0 HOH
 2.809
 NE2
 O
GLN E:279 N:279 145.0 0.806 T -92.5 5.1 NA NA NA
2h89 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 GLN A:279 A:279 166.0 0.922 S -75.3 -21.0 166.0 0.922 0.0 HOH
 2.998
 O
 O
2wqy 1 Q9YHT1 91.79 0.0 X-RAY
 2010-08-25 GLN A:279 A:279 144.0 0.8 T -97.1 6.7 144.0 0.8 0.0 HOH
 2.548
 OE1
 O
GLN E:279 N:279 142.0 0.789 T -96.9 6.9 NA NA NA
6myo 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLN A:279 A:279 138.0 0.767 T -96.5 2.5 138.0 0.767 0.0 HOH
 7.759
 N
 O
6myp 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLN A:279 A:279 126.0 0.7 T -95.5 12.6 126.0 0.7 0.0 HOH
 8.438
 O
 O
6myq 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLN A:279 A:279 147.0 0.817 T -93.5 23.4 147.0 0.817 0.0 HOH
 9.323
 C
 O
6myr 1 F1NPJ4 91.79 0.0 X-RAY
 2019-10-16 GLN A:279 A:279 158.0 0.878 T -109.7 18.1 158.0 0.878 0.0
6mys 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLN A:279 A:279 153.0 0.85 T -98.7 14.3 153.0 0.85 0.0
6myt 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLN A:279 A:279 139.0 0.772 T -104.7 17.7 139.0 0.772 0.0 HOH
 5.056
 NE2
 O
6myu 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLN A:279 A:279 149.0 0.828 T -107.6 16.7 149.0 0.828 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p31040-f1 1 P31040 100.0 0.0 GLN A:322 A:322 141.0 0.783 T -95.2 1.0