Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 233666 . G A CCDS3853.1:NM_004168.2:c.970Gaa>Aaa_NP_004159.2:p.324E>K Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6vax 1 P31040 100.0 0.0 X-RAY
 2020-08-26 GLU A:292 A:324 81.0 0.426 -84.6 135.7 81.0 0.426 0.0
GLU C:292 C:324 78.0 0.411 -83.7 140.9 NA NA NA
4ytp 1 Q0QF01 94.58 0.0 X-RAY
 2015-08-05 GLU A:324 A:282 70.0 0.368 -51.9 138.8 70.0 0.368 0.0
4yxd 1 Q0QF01 94.58 0.0 X-RAY
 2016-03-02 GLU A:324 A:282 76.0 0.4 S -71.5 136.5 76.0 0.4 0.0
1zoy 1 Q0QF01 96.3 0.0 X-RAY
 2005-07-12 GLU A:282 A:282 43.0 0.226 -72.4 143.0 43.0 0.226 0.0 HOH
 2.925
 OE2
 O
1zp0 1 ? 96.3 0.0 X-RAY
 2005-07-12 GLU A:282 A:282 47.0 0.247 -74.3 145.8 47.0 0.247 0.0
3abv 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 67.0 0.353 -62.2 127.4 67.0 0.353 0.0
3ae1 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 66.0 0.347 S -67.6 133.4 66.0 0.347 0.0
3ae2 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 69.0 0.363 S -68.4 138.7 69.0 0.363 0.0
3ae3 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 60.0 0.316 -70.6 132.7 60.0 0.316 0.0
3ae4 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 55.0 0.289 -66.9 137.6 55.0 0.289 0.0
3ae5 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 65.0 0.342 -75.1 142.1 65.0 0.342 0.0
3ae6 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 53.0 0.279 -68.0 134.2 53.0 0.279 0.0
3ae7 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 53.0 0.279 -74.7 141.9 53.0 0.279 0.0
3ae8 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 70.0 0.368 S -74.8 146.5 70.0 0.368 0.0
3ae9 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 101.0 0.532 S -72.9 145.8 101.0 0.532 0.0
3aea 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 74.0 0.389 -71.7 147.8 74.0 0.389 0.0
3aeb 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 78.0 0.411 -68.0 130.1 78.0 0.411 0.0
3aec 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 69.0 0.363 -67.2 134.5 69.0 0.363 0.0
3aed 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 64.0 0.337 -76.9 139.0 64.0 0.337 0.0
3aee 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 74.0 0.389 -56.8 138.9 74.0 0.389 0.0
3aef 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 50.0 0.263 -76.2 120.5 50.0 0.263 0.0
3aeg 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:282 A:282 68.0 0.358 S -71.8 145.0 68.0 0.358 0.0
3sfd 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 GLU A:282 A:282 65.0 0.342 -68.7 143.9 65.0 0.342 0.0 HOH
 3.231
 CG
 O
3sfe 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 GLU A:282 A:282 76.0 0.4 -60.1 131.4 76.0 0.4 0.0 HOH
 9.222
 OE2
 O
1yq3 1 Q9YHT1 91.79 0.0 X-RAY
 2005-12-20 GLU A:281 A:281 58.0 0.305 -78.6 139.4 58.0 0.305 0.0 HOH
 4.947
 O
 O
1yq4 1 50736125 91.79 0.0 X-RAY
 2005-12-20 GLU A:281 A:281 60.0 0.316 -82.0 138.6 60.0 0.316 0.0 HOH
 3.344
 CA
 O
2fbw 1 F1NPJ4 91.79 0.0 X-RAY
 2005-12-20 GLU A:281 A:281 60.0 0.316 -75.4 132.0 60.0 0.316 0.0 UNL
UNL
HOH
 9.035
4.029
3.413
 C
OE1
C
 O10
O
O
GLU E:281 N:281 58.0 0.305 -75.5 134.0 NA NA NA
2h88 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 GLU A:281 A:281 64.0 0.337 -81.5 134.5 64.0 0.337 0.0 HOH
 2.477
 OE1
 O
GLU E:281 N:281 61.0 0.321 -80.7 135.6 NA NA NA
2h89 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 GLU A:281 A:281 67.0 0.353 -86.6 152.7 67.0 0.353 0.0 HOH
 5.434
 O
 O
2wqy 1 Q9YHT1 91.79 0.0 X-RAY
 2010-08-25 GLU A:281 A:281 58.0 0.305 -77.9 136.1 58.0 0.305 0.0 UNL
HOH
 9.694
2.611
 C
OE2
 O2
O
GLU E:281 N:281 59.0 0.311 -78.0 136.8 NA NA NA
6myo 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLU A:281 A:281 69.0 0.363 -73.0 132.6 69.0 0.363 0.0 HOH
 5.077
 O
 O
6myp 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLU A:281 A:281 73.0 0.384 -86.2 130.4 73.0 0.384 0.0 HOH
 3.763
 CG
 O
6myq 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLU A:281 A:281 61.0 0.321 -78.9 137.9 61.0 0.321 0.0 HOH
 5.183
 O
 O
6myr 1 F1NPJ4 91.79 0.0 X-RAY
 2019-10-16 GLU A:281 A:281 68.0 0.358 -91.2 127.4 68.0 0.358 0.0
6mys 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLU A:281 A:281 66.0 0.347 -91.6 135.8 66.0 0.347 0.0
6myt 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLU A:281 A:281 69.0 0.363 -88.4 132.6 69.0 0.363 0.0 HOH
 5.148
 O
 O
6myu 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLU A:281 A:281 62.0 0.326 -77.8 130.8 62.0 0.326 0.0 HOH
 5.051
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p31040-f1 1 P31040 100.0 0.0 GLU A:324 A:324 62.0 0.326 -72.5 128.0