Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 233678 . G A CCDS3853.1:NM_004168.2:c.982Gag>Aag_NP_004159.2:p.328E>K Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6vax 1 P31040 100.0 0.0 X-RAY
 2020-08-26 GLU A:296 A:328 75.0 0.395 H -64.0 -25.5 75.0 0.395 0.0
GLU C:296 C:328 75.0 0.395 H -65.4 -25.6 NA NA NA
4ytp 1 Q0QF01 94.58 0.0 X-RAY
 2015-08-05 GLU A:328 A:286 84.0 0.442 H -76.3 -31.5 84.0 0.442 0.0
4yxd 1 Q0QF01 94.58 0.0 X-RAY
 2016-03-02 GLU A:328 A:286 75.0 0.395 H -84.6 -31.2 75.0 0.395 0.0
1zoy 1 Q0QF01 96.3 0.0 X-RAY
 2005-07-12 GLU A:286 A:286 82.0 0.432 T 175.0 -18.3 82.0 0.432 0.0 HOH
 4.375
 OE1
 O
1zp0 1 ? 96.3 0.0 X-RAY
 2005-07-12 GLU A:286 A:286 84.0 0.442 T 179.7 -14.3 84.0 0.442 0.0
3abv 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 102.0 0.537 H -77.7 -24.0 102.0 0.537 0.0
3ae1 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 102.0 0.537 H -82.9 -23.5 102.0 0.537 0.0
3ae2 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 101.0 0.532 H -83.0 -19.7 101.0 0.532 0.0
3ae3 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 91.0 0.479 T -142.1 -16.5 91.0 0.479 0.0
3ae4 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 98.0 0.516 H -72.3 -28.3 98.0 0.516 0.0
3ae5 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 75.0 0.395 T -133.8 -41.7 75.0 0.395 0.0
3ae6 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 97.0 0.511 H -101.2 -12.7 97.0 0.511 0.0
3ae7 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 87.0 0.458 H -79.9 -15.2 87.0 0.458 0.0
3ae8 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 93.0 0.489 H -80.2 -24.3 93.0 0.489 0.0
3ae9 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 103.0 0.542 H -85.0 -21.8 103.0 0.542 0.0
3aea 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 97.0 0.511 H -83.2 -17.4 97.0 0.511 0.0
3aeb 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 90.0 0.474 H -76.0 -18.2 90.0 0.474 0.0
3aec 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 109.0 0.574 T -134.8 -29.9 109.0 0.574 0.0
3aed 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 90.0 0.474 G -84.4 -13.5 90.0 0.474 0.0
3aee 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 78.0 0.411 G -131.8 -20.0 78.0 0.411 0.0
3aef 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 93.0 0.489 H -62.8 -29.4 93.0 0.489 0.0
3aeg 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLU A:286 A:286 92.0 0.484 H -72.6 -29.7 92.0 0.484 0.0
3sfd 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 GLU A:286 A:286 85.0 0.447 T -163.1 -22.8 85.0 0.447 0.0 HOH
 3.124
 OE2
 O
3sfe 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 GLU A:286 A:286 93.0 0.489 H -74.2 -23.3 93.0 0.489 0.0
1yq3 1 Q9YHT1 91.79 0.0 X-RAY
 2005-12-20 GLU A:285 A:285 93.0 0.489 H -63.1 -25.0 93.0 0.489 0.0 HOH
 4.486
 N
 O
1yq4 1 50736125 91.79 0.0 X-RAY
 2005-12-20 GLU A:285 A:285 96.0 0.505 H -64.1 -10.2 96.0 0.505 0.0 HOH
 4.651
 OE1
 O
2fbw 1 F1NPJ4 91.79 0.0 X-RAY
 2005-12-20 GLU A:285 A:285 96.0 0.505 H -63.5 -23.0 96.0 0.505 0.0 UNL
UNL
UNL
HOH
 6.711
8.965
8.597
3.638
 OE2
O
O
OE2
 C8
O1
O
O
GLU E:285 N:285 94.0 0.495 H -63.1 -23.2 NA NA NA
2h88 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 GLU A:285 A:285 98.0 0.516 H -63.1 -24.9 98.0 0.516 0.0 HOH
 3.592
 OE2
 O
GLU E:285 N:285 96.0 0.505 H -63.4 -25.0 NA NA NA
2h89 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 GLU A:285 A:285 92.0 0.484 H -67.9 -27.3 92.0 0.484 0.0 HOH
 4.554
 N
 O
2wqy 1 Q9YHT1 91.79 0.0 X-RAY
 2010-08-25 GLU A:285 A:285 91.0 0.479 H -64.7 -24.0 91.0 0.479 0.0 UNL
HOH
 7.306
2.616
 OE2
OE1
 O1
O
GLU E:285 N:285 91.0 0.479 H -65.0 -23.2 NA NA NA
6myo 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLU A:285 A:285 91.0 0.479 H -58.3 -21.4 91.0 0.479 0.0 HOH
 4.447
 N
 O
6myp 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLU A:285 A:285 88.0 0.463 H -66.7 -21.0 88.0 0.463 0.0 HOH
 3.275
 OE1
 O
6myq 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLU A:285 A:285 91.0 0.479 H -62.1 -24.4 91.0 0.479 0.0 HOH
 4.512
 N
 O
6myr 1 F1NPJ4 91.79 0.0 X-RAY
 2019-10-16 GLU A:285 A:285 91.0 0.479 H -66.8 -22.4 91.0 0.479 0.0
6mys 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLU A:285 A:285 91.0 0.479 H -65.8 -15.6 91.0 0.479 0.0
6myt 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLU A:285 A:285 92.0 0.484 H -63.1 -25.8 92.0 0.484 0.0 HOH
 4.892
 N
 O
6myu 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLU A:285 A:285 91.0 0.479 H -61.2 -25.2 91.0 0.479 0.0 UNL
HOH
 7.318
4.640
 CG
N
 O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p31040-f1 1 P31040 100.0 0.0 GLU A:328 A:328 90.0 0.474 H -64.8 -26.9