Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 233681 . C A CCDS3853.1:NM_004168.2:c.985Cga>Aga_NP_004159.2:p.329R>R Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6vax 1 P31040 100.0 0.0 X-RAY
 2020-08-26 ARG A:297 A:329 150.0 0.667 H -90.1 -45.7 150.0 0.667 0.0
ARG C:297 C:329 160.0 0.711 H -88.1 -46.2 NA NA NA
4ytp 1 Q0QF01 94.58 0.0 X-RAY
 2015-08-05 ARG A:329 A:287 157.0 0.698 H -64.8 -34.3 157.0 0.698 0.0
4yxd 1 Q0QF01 94.58 0.0 X-RAY
 2016-03-02 ARG A:329 A:287 107.0 0.476 H -71.6 -48.7 107.0 0.476 0.0
1zoy 1 Q0QF01 96.3 0.0 X-RAY
 2005-07-12 ARG A:287 A:287 158.0 0.702 T -95.8 -46.9 158.0 0.702 0.0 HOH
 2.558
 NH1
 O
1zp0 1 ? 96.3 0.0 X-RAY
 2005-07-12 ARG A:287 A:287 161.0 0.716 T -99.7 -44.1 161.0 0.716 0.0
3abv 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 176.0 0.782 H -81.9 -36.3 176.0 0.782 0.0
3ae1 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 128.0 0.569 H -87.5 -40.3 128.0 0.569 0.0
3ae2 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 161.0 0.716 H -87.9 -21.8 161.0 0.716 0.0
3ae3 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 156.0 0.693 T -83.0 -32.4 156.0 0.693 0.0
3ae4 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 176.0 0.782 H -71.5 -38.2 176.0 0.782 0.0
3ae5 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 140.0 0.622 T -78.1 -29.2 140.0 0.622 0.0
3ae6 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 133.0 0.591 H -89.9 -38.5 133.0 0.591 0.0
3ae7 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 169.0 0.751 H -82.4 -34.5 169.0 0.751 0.0
3ae8 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 144.0 0.64 H -70.5 -43.7 144.0 0.64 0.0
3ae9 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 141.0 0.627 H -68.4 -39.0 141.0 0.627 0.0
3aea 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 147.0 0.653 H -75.1 -28.8 147.0 0.653 0.0
3aeb 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 132.0 0.587 H -87.7 -44.4 132.0 0.587 0.0
3aec 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 156.0 0.693 T -73.6 -30.3 156.0 0.693 0.0
3aed 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 143.0 0.636 T -78.0 -26.6 143.0 0.636 0.0
3aee 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 146.0 0.649 T -93.1 -11.2 146.0 0.649 0.0
3aef 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 154.0 0.684 H -78.1 -44.7 154.0 0.684 0.0
3aeg 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:287 A:287 161.0 0.716 H -74.0 -35.1 161.0 0.716 0.0
3sfd 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 ARG A:287 A:287 128.0 0.569 T -110.3 -31.2 128.0 0.569 0.0 HOH
 5.833
 N
 O
3sfe 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 ARG A:287 A:287 114.0 0.507 H -90.4 -37.3 114.0 0.507 0.0 HOH
 8.632
 NH1
 O
1yq3 1 Q9YHT1 91.79 0.0 X-RAY
 2005-12-20 ARG A:286 A:286 109.0 0.484 H -83.3 -51.6 109.0 0.484 0.0 HOH
 2.629
 NH1
 O
1yq4 1 50736125 91.79 0.0 X-RAY
 2005-12-20 ARG A:286 A:286 104.0 0.462 H -103.8 -26.6 104.0 0.462 0.0 HOH
 6.878
 N
 O
2fbw 1 F1NPJ4 91.79 0.0 X-RAY
 2005-12-20 ARG A:286 A:286 113.0 0.502 H -90.8 -40.6 113.0 0.502 0.0 UNL
UNL
UNL
HOH
 7.225
4.330
6.595
3.038
 O
NH2
O
NH1
 O1
O
O
O
ARG E:286 N:286 112.0 0.498 H -90.8 -39.9 NA NA NA
2h88 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 ARG A:286 A:286 115.0 0.511 H -89.3 -38.8 115.0 0.511 0.0 HOH
 2.902
 O
 O
ARG E:286 N:286 113.0 0.502 H -88.5 -38.5 NA NA NA
2h89 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 ARG A:286 A:286 109.0 0.484 H -77.5 -49.5 109.0 0.484 0.0 HOH
 6.838
 N
 O
2wqy 1 Q9YHT1 91.79 0.0 X-RAY
 2010-08-25 ARG A:286 A:286 110.0 0.489 H -89.3 -37.0 110.0 0.489 0.0 HOH
 2.692
 O
 O
ARG E:286 N:286 109.0 0.484 H -90.4 -36.0 NA NA NA
6myo 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:286 A:286 113.0 0.502 H -96.0 -38.0 113.0 0.502 0.0 HOH
 6.674
 N
 O
6myp 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:286 A:286 116.0 0.516 H -88.3 -38.1 116.0 0.516 0.0 HOH
 5.752
 N
 O
6myq 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:286 A:286 113.0 0.502 H -86.8 -40.3 113.0 0.502 0.0 HOH
 6.819
 N
 O
6myr 1 F1NPJ4 91.79 0.0 X-RAY
 2019-10-16 ARG A:286 A:286 116.0 0.516 H -93.7 -34.2 116.0 0.516 0.0
6mys 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:286 A:286 116.0 0.516 H -99.1 -36.7 116.0 0.516 0.0
6myt 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:286 A:286 113.0 0.502 H -91.0 -35.7 113.0 0.502 0.0 HOH
 7.179
 N
 O
6myu 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:286 A:286 114.0 0.507 H -88.8 -37.2 114.0 0.507 0.0 HOH
 6.852
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p31040-f1 1 P31040 100.0 0.0 ARG A:329 A:329 115.0 0.511 H -81.1 -40.8