Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 233687 . G A CCDS3853.1:NM_004168.2:c.991Gcc>Acc_NP_004159.2:p.331A>T Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), mRNA.
pdb_id: 
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auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6vax 1 P31040 100.0 0.0 X-RAY
 2020-08-26 ALA A:299 A:331 15.0 0.13 -149.1 80.8 15.0 0.13 0.0
ALA C:299 C:331 15.0 0.13 -156.2 82.5 NA NA NA
4ytp 1 Q0QF01 94.58 0.0 X-RAY
 2015-08-05 ALA A:331 A:289 4.0 0.035 -115.7 125.1 4.0 0.035 0.0
4yxd 1 Q0QF01 94.58 0.0 X-RAY
 2016-03-02 ALA A:331 A:289 3.0 0.026 -135.9 86.2 3.0 0.026 0.0
1zoy 1 Q0QF01 96.3 0.0 X-RAY
 2005-07-12 ALA A:289 A:289 2.0 0.017 -159.2 87.8 2.0 0.017 0.0 HOH
 3.161
 CB
 O
1zp0 1 ? 96.3 0.0 X-RAY
 2005-07-12 ALA A:289 A:289 2.0 0.017 -154.0 92.3 2.0 0.017 0.0
3abv 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 1.0 0.009 -116.7 106.5 1.0 0.009 0.0
3ae1 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 1.0 0.009 -113.8 106.3 1.0 0.009 0.0
3ae2 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 1.0 0.009 -134.2 111.2 1.0 0.009 0.0
3ae3 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 1.0 0.009 -101.5 115.0 1.0 0.009 0.0
3ae4 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 3.0 0.026 -105.0 100.1 3.0 0.026 0.0
3ae5 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 0.0 0.0 -135.2 108.3 0.0 0.0 0.0
3ae6 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 2.0 0.017 -111.4 103.3 2.0 0.017 0.0
3ae7 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 1.0 0.009 -124.4 122.5 1.0 0.009 0.0
3ae8 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 2.0 0.017 -116.1 119.4 2.0 0.017 0.0
3ae9 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 3.0 0.026 -97.4 119.7 3.0 0.026 0.0
3aea 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 4.0 0.035 -111.9 113.8 4.0 0.035 0.0
3aeb 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 0.0 0.0 -121.2 105.8 0.0 0.0 0.0
3aec 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 0.0 0.0 -124.4 85.1 0.0 0.0 0.0
3aed 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 4.0 0.035 -93.6 121.7 4.0 0.035 0.0
3aee 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 5.0 0.043 -142.4 99.3 5.0 0.043 0.0
3aef 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 2.0 0.017 -140.9 89.3 2.0 0.017 0.0
3aeg 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ALA A:289 A:289 11.0 0.096 -103.4 104.2 11.0 0.096 0.0
3sfd 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 ALA A:289 A:289 0.0 0.0 S -147.1 82.8 0.0 0.0 0.0 HOH
 5.046
 CB
 O
3sfe 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 ALA A:289 A:289 1.0 0.009 S -143.4 81.1 1.0 0.009 0.0 HOH
 8.202
 C
 O
1yq3 1 Q9YHT1 91.79 0.0 X-RAY
 2005-12-20 ALA A:288 A:288 2.0 0.017 S -151.7 74.2 2.0 0.017 0.0 UNL
HOH
 6.985
3.328
 C
C
 O1
O
1yq4 1 50736125 91.79 0.0 X-RAY
 2005-12-20 ALA A:288 A:288 1.0 0.009 S -145.8 74.8 1.0 0.009 0.0 HOH
 7.002
 O
 O
2fbw 1 F1NPJ4 91.79 0.0 X-RAY
 2005-12-20 ALA A:288 A:288 0.0 0.0 -144.2 83.8 0.0 0.0 0.0 UNL
UNL
UNL
UNL
HOH
 9.930
4.158
8.237
4.873
3.677
 O
CB
O
CA
C
 C2
O1
O8
O
O
ALA E:288 N:288 0.0 0.0 -144.9 82.8 NA NA NA
2h88 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 ALA A:288 A:288 0.0 0.0 S -140.8 79.1 0.0 0.0 0.0 HOH
 3.494
 CA
 O
ALA E:288 N:288 0.0 0.0 S -141.9 77.2 NA NA NA
2h89 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 ALA A:288 A:288 0.0 0.0 -126.6 80.2 0.0 0.0 0.0 UNL
HOH
 7.482
3.578
 C
C
 O1
O
2wqy 1 Q9YHT1 91.79 0.0 X-RAY
 2010-08-25 ALA A:288 A:288 0.0 0.0 -138.0 80.0 0.0 0.0 0.0 HOH
 3.725
 C
 O
ALA E:288 N:288 1.0 0.009 -138.9 80.0 NA NA NA
6myo 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ALA A:288 A:288 0.0 0.0 -133.5 84.0 0.0 0.0 0.0 HOH
 7.120
 O
 O
6myp 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ALA A:288 A:288 0.0 0.0 -126.9 91.4 0.0 0.0 0.0 UNL
HOH
 9.471
4.760
 CB
O
 O
O
6myq 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ALA A:288 A:288 1.0 0.009 -135.7 88.4 1.0 0.009 0.0 HOH
 6.640
 CB
 O
6myr 1 F1NPJ4 91.79 0.0 X-RAY
 2019-10-16 ALA A:288 A:288 0.0 0.0 -128.4 86.5 0.0 0.0 0.0
6mys 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ALA A:288 A:288 0.0 0.0 -130.0 88.2 0.0 0.0 0.0
6myt 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ALA A:288 A:288 0.0 0.0 -143.7 89.4 0.0 0.0 0.0 HOH
 7.507
 O
 O
6myu 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ALA A:288 A:288 1.0 0.009 S -141.2 81.7 1.0 0.009 0.0 UNL
HOH
 7.434
6.231
 O
CB
 O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p31040-f1 1 P31040 100.0 0.0 ALA A:331 A:331 0.0 0.0 S -137.8 78.2