Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 233750 . C A CCDS3853.1:NM_004168.2:c.1054Cga>Aga_NP_004159.2:p.352R>R Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6vax 1 P31040 100.0 0.0 X-RAY
 2020-08-26 ARG A:320 A:352 114.0 0.507 H -67.6 -48.8 114.0 0.507 0.0 HOH
 7.026
 CD
 O
ARG C:320 C:352 143.0 0.636 H -76.1 -38.5 NA NA NA
4ytp 1 Q0QF01 94.58 0.0 X-RAY
 2015-08-05 ARG A:352 A:310 211.0 0.938 H -54.8 -40.6 211.0 0.938 0.0
4yxd 1 Q0QF01 94.58 0.0 X-RAY
 2016-03-02 ARG A:352 A:310 138.0 0.613 H -67.2 -38.7 138.0 0.613 0.0
1zoy 1 Q0QF01 96.3 0.0 X-RAY
 2005-07-12 ARG A:310 A:310 193.0 0.858 H -66.5 -49.8 193.0 0.858 0.0 HOH
 8.764
 NH1
 O
1zp0 1 ? 96.3 0.0 X-RAY
 2005-07-12 ARG A:310 A:310 193.0 0.858 H -66.2 -47.8 193.0 0.858 0.0
3abv 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 144.0 0.64 H -51.1 -46.9 144.0 0.64 0.0
3ae1 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 142.0 0.631 H -47.0 -42.8 142.0 0.631 0.0
3ae2 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 133.0 0.591 H -53.9 -42.3 133.0 0.591 0.0
3ae3 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 197.0 0.876 T -61.4 -27.9 197.0 0.876 0.0
3ae4 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 146.0 0.649 H -69.2 -10.4 146.0 0.649 0.0
3ae5 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 161.0 0.716 H -62.2 -32.9 161.0 0.716 0.0
3ae6 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 164.0 0.729 H -63.5 -37.7 164.0 0.729 0.0
3ae7 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 173.0 0.769 H -64.5 -31.6 173.0 0.769 0.0
3ae8 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 169.0 0.751 H -65.0 -37.3 169.0 0.751 0.0
3ae9 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 195.0 0.867 H -65.6 -26.1 195.0 0.867 0.0
3aea 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 189.0 0.84 H -70.3 -19.2 189.0 0.84 0.0
3aeb 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 126.0 0.56 H -65.8 -32.0 126.0 0.56 0.0
3aec 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 146.0 0.649 H -51.5 -44.2 146.0 0.649 0.0
3aed 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 211.0 0.938 H -77.3 -14.2 211.0 0.938 0.0
3aee 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 181.0 0.804 H -71.2 -24.1 181.0 0.804 0.0
3aef 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 156.0 0.693 H -55.1 -22.6 156.0 0.693 0.0
3aeg 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:310 A:310 214.0 0.951 H -74.2 -29.7 214.0 0.951 0.0
3sfd 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 ARG A:310 A:310 177.0 0.787 H -60.0 -40.9 177.0 0.787 0.0 HOH
 3.011
 NE
 O
3sfe 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 ARG A:310 A:310 141.0 0.627 H -58.1 -45.0 141.0 0.627 0.0 HOH
 6.579
 O
 O
1yq3 1 Q9YHT1 91.79 0.0 X-RAY
 2005-12-20 ARG A:309 A:309 137.0 0.609 I -72.9 -15.9 137.0 0.609 0.0 UNL
HOH
 3.225
3.127
 O
NH2
 O1
O
1yq4 1 50736125 91.79 0.0 X-RAY
 2005-12-20 ARG A:309 A:309 133.0 0.591 I -67.7 -16.9 133.0 0.591 0.0 HOH
 3.396
 CD
 O
2fbw 1 F1NPJ4 91.79 0.0 X-RAY
 2005-12-20 ARG A:309 A:309 131.0 0.582 H -55.3 -29.2 131.0 0.582 0.0 UNL
UNL
HOH
 7.247
8.906
2.828
 CG
CG
NH2
 O
O
O
ARG E:309 N:309 133.0 0.591 H -56.4 -31.4 NA NA NA
2h88 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 ARG A:309 A:309 131.0 0.582 H -60.5 -33.1 131.0 0.582 0.0 HOH
 2.757
 NH1
 O
ARG E:309 N:309 133.0 0.591 H -59.3 -33.6 NA NA NA
2h89 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 ARG A:309 A:309 142.0 0.631 I -54.8 -10.8 142.0 0.631 0.0 UNL
HOH
 2.991
2.925
 O
NH2
 O1
O
2wqy 1 Q9YHT1 91.79 0.0 X-RAY
 2010-08-25 ARG A:309 A:309 134.0 0.596 H -58.0 -37.2 134.0 0.596 0.0 HOH
 2.830
 NH2
 O
ARG E:309 N:309 134.0 0.596 H -57.8 -39.0 NA NA NA
6myo 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:309 A:309 132.0 0.587 I -71.9 -29.5 132.0 0.587 0.0 HOH
 4.402
 NH1
 O
6myp 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:309 A:309 136.0 0.604 H -71.5 -18.4 136.0 0.604 0.0 HOH
 4.730
 N
 O
6myq 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:309 A:309 132.0 0.587 I -73.5 -17.3 132.0 0.587 0.0 HOH
 2.268
 NH1
 O
6myr 1 F1NPJ4 91.79 0.0 X-RAY
 2019-10-16 ARG A:309 A:309 133.0 0.591 H -76.0 -2.7 133.0 0.591 0.0
6mys 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:309 A:309 135.0 0.6 I -69.1 -21.6 135.0 0.6 0.0
6myt 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:309 A:309 138.0 0.613 H -68.9 -27.0 138.0 0.613 0.0 HOH
 7.008
 N
 O
6myu 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:309 A:309 133.0 0.591 I -72.0 -16.4 133.0 0.591 0.0 HOH
 2.550
 NH1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p31040-f1 1 P31040 100.0 0.0 ARG A:352 A:352 137.0 0.609 I -60.5 -31.7