Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 233759 . A C CCDS3853.1:NM_004168.2:c.1063Aga>Cga_NP_004159.2:p.355R>R Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6vax 1 P31040 100.0 0.0 X-RAY
 2020-08-26 ARG A:323 A:355 39.0 0.173 -97.5 41.1 39.0 0.173 0.0
ARG C:323 C:355 36.0 0.16 -100.0 32.4 NA NA NA
4ytp 1 Q0QF01 94.58 0.0 X-RAY
 2015-08-05 ARG A:355 A:313 63.0 0.28 -107.2 49.4 63.0 0.28 0.0
4yxd 1 Q0QF01 94.58 0.0 X-RAY
 2016-03-02 ARG A:355 A:313 62.0 0.276 -70.0 -10.7 62.0 0.276 0.0
1zoy 1 Q0QF01 96.3 0.0 X-RAY
 2005-07-12 ARG A:313 A:313 40.0 0.178 -143.8 39.5 40.0 0.178 0.0 HOH
 2.614
 NE
 O
1zp0 1 ? 96.3 0.0 X-RAY
 2005-07-12 ARG A:313 A:313 40.0 0.178 -143.8 38.6 40.0 0.178 0.0
3abv 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 71.0 0.316 -87.6 60.3 71.0 0.316 0.0
3ae1 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 62.0 0.276 -82.7 65.9 62.0 0.276 0.0
3ae2 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 64.0 0.284 -93.3 47.8 64.0 0.284 0.0
3ae3 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 69.0 0.307 -95.7 60.5 69.0 0.307 0.0
3ae4 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 35.0 0.156 -94.7 32.2 35.0 0.156 0.0
3ae5 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 47.0 0.209 -90.8 26.9 47.0 0.209 0.0
3ae6 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 72.0 0.32 -99.0 40.4 72.0 0.32 0.0
3ae7 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 63.0 0.28 -96.7 32.8 63.0 0.28 0.0
3ae8 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 46.0 0.204 -97.5 57.6 46.0 0.204 0.0
3ae9 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 56.0 0.249 -80.4 67.7 56.0 0.249 0.0
3aea 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 70.0 0.311 -74.8 77.9 70.0 0.311 0.0
3aeb 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 66.0 0.293 -93.2 48.5 66.0 0.293 0.0
3aec 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 41.0 0.182 -102.3 44.2 41.0 0.182 0.0
3aed 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 85.0 0.378 -88.7 45.6 85.0 0.378 0.0
3aee 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 58.0 0.258 -81.8 62.1 58.0 0.258 0.0
3aef 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 71.0 0.316 -89.0 27.1 71.0 0.316 0.0
3aeg 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 ARG A:313 A:313 53.0 0.236 -97.0 54.0 53.0 0.236 0.0
3sfd 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 ARG A:313 A:313 75.0 0.333 -82.5 51.2 75.0 0.333 0.0 HOH
 5.589
 C
 O
3sfe 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 ARG A:313 A:313 67.0 0.298 -72.4 42.2 67.0 0.298 0.0 HOH
 3.235
 NH1
 O
1yq3 1 Q9YHT1 91.79 0.0 X-RAY
 2005-12-20 ARG A:312 A:312 37.0 0.164 I -85.1 24.8 37.0 0.164 0.0 UNL
HOH
 6.346
3.981
 N
N
 O1
O
1yq4 1 50736125 91.79 0.0 X-RAY
 2005-12-20 ARG A:312 A:312 39.0 0.173 I -93.9 17.7 39.0 0.173 0.0 HOH
 3.686
 N
 O
2fbw 1 F1NPJ4 91.79 0.0 X-RAY
 2005-12-20 ARG A:312 A:312 44.0 0.196 -108.7 22.1 44.0 0.196 0.0 UNL
HOH
 3.516
3.529
 CD
N
 O
O
ARG E:312 N:312 43.0 0.191 -109.7 21.5 NA NA NA
2h88 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 ARG A:312 A:312 45.0 0.2 -109.2 27.4 45.0 0.2 0.0 HOH
 3.364
 NH1
 O
ARG E:312 N:312 43.0 0.191 -108.1 27.0 NA NA NA
2h89 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 ARG A:312 A:312 43.0 0.191 I -95.6 18.5 43.0 0.191 0.0 UNL
HOH
 6.280
4.016
 N
N
 O1
O
2wqy 1 Q9YHT1 91.79 0.0 X-RAY
 2010-08-25 ARG A:312 A:312 42.0 0.187 -104.5 22.2 42.0 0.187 0.0 UNL
HOH
 9.627
3.339
 N
CD
 C2
O
ARG E:312 N:312 41.0 0.182 -104.5 22.9 NA NA NA
6myo 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:312 A:312 60.0 0.267 I -113.6 28.0 60.0 0.267 0.0 HOH
 7.375
 O
 O
6myp 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:312 A:312 59.0 0.262 -119.7 33.5 59.0 0.262 0.0 HOH
 3.324
 N
 O
6myq 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:312 A:312 46.0 0.204 I -103.5 25.7 46.0 0.204 0.0 HOH
 7.435
 NH2
 O
6myr 1 F1NPJ4 91.79 0.0 X-RAY
 2019-10-16 ARG A:312 A:312 64.0 0.284 -91.9 32.1 64.0 0.284 0.0
6mys 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:312 A:312 60.0 0.267 I -103.0 35.4 60.0 0.267 0.0
6myt 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:312 A:312 58.0 0.258 -111.7 33.0 58.0 0.258 0.0 HOH
 4.993
 N
 O
6myu 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 ARG A:312 A:312 52.0 0.231 I -102.4 24.5 52.0 0.231 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p31040-f1 1 P31040 100.0 0.0 ARG A:355 A:355 37.0 0.164 I -98.4 7.7