Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 254544 . C A CCDS3853.1:NM_004168.2:c.1831Cag>Aag_NP_004159.2:p.611Q>K Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6vax 1 P31040 100.0 0.0 X-RAY
 2020-08-26 GLN A:579 A:611 189.0 1.0 T -67.9 130.6 189.0 1.0 0.0
GLN C:579 C:611 107.0 NA T -56.1 -33.6 NA NA NA
4ytp 1 Q0QF01 94.58 0.0 X-RAY
 2015-08-05 GLN A:611 A:569 175.0 0.972 S 65.2 -116.7 175.0 0.972 0.0
4yxd 1 Q0QF01 94.58 0.0 X-RAY
 2016-03-02 GLN A:611 A:569 182.0 1.0 T -66.9 149.2 182.0 1.0 0.0
1zoy 1 Q0QF01 96.3 0.0 X-RAY
 2005-07-12 GLN A:569 A:569 182.0 1.0 S 166.1 -58.4 182.0 1.0 0.0 HOH
 2.350
 N
 O
1zp0 1 ? 96.3 0.0 X-RAY
 2005-07-12 GLN A:569 A:569 181.0 1.0 S 163.7 -61.3 181.0 1.0 0.0
3abv 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 188.0 1.0 T -19.7 -98.1 188.0 1.0 0.0
3ae1 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 174.0 0.967 S -155.7 -80.3 174.0 0.967 0.0
3ae2 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 182.0 1.0 T -40.9 -96.2 182.0 1.0 0.0
3ae3 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 177.0 0.983 S 73.3 -14.2 177.0 0.983 0.0
3ae4 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 150.0 0.833 S 66.3 32.6 150.0 0.833 0.0
3ae5 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 168.0 0.933 S -144.2 -66.4 168.0 0.933 0.0
3ae6 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 178.0 0.989 S -134.4 -93.7 178.0 0.989 0.0
3ae7 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 188.0 1.0 S -164.5 -41.5 188.0 1.0 0.0
3ae8 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 185.0 1.0 S -169.3 -64.8 185.0 1.0 0.0
3ae9 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 165.0 0.917 S 71.5 -20.1 165.0 0.917 0.0
3aea 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 176.0 0.978 S -159.3 -80.8 176.0 0.978 0.0
3aeb 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 182.0 1.0 T -41.9 -72.4 182.0 1.0 0.0
3aec 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 177.0 0.983 S -159.4 -73.2 177.0 0.983 0.0
3aed 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 184.0 1.0 T -58.2 -55.7 184.0 1.0 0.0
3aee 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 178.0 0.989 S -81.9 -78.3 178.0 0.989 0.0
3aef 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 183.0 1.0 S -55.8 -77.4 183.0 1.0 0.0
3aeg 1 Q0QF01 96.3 0.0 X-RAY
 2011-02-09 GLN A:569 A:569 177.0 0.983 S -65.7 -84.5 177.0 0.983 0.0
3sfd 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 GLN A:569 A:569 180.0 1.0 S 174.1 -55.7 180.0 1.0 0.0
3sfe 1 Q0QF01 96.3 0.0 X-RAY
 2011-09-07 GLN A:569 A:569 171.0 0.95 S 78.3 -69.0 171.0 0.95 0.0 HOH
 6.303
 O
 O
1yq3 1 Q9YHT1 91.79 0.0 X-RAY
 2005-12-20 GLN A:568 A:568 173.0 0.961 T -56.7 113.8 173.0 0.961 0.0 HOH
 2.596
 O
 O
1yq4 1 50736125 91.79 0.0 X-RAY
 2005-12-20 GLN A:568 A:568 177.0 0.983 T -48.5 102.4 177.0 0.983 0.0 HOH
 5.146
 C
 O
2fbw 1 F1NPJ4 91.79 0.0 X-RAY
 2005-12-20 GLN A:568 A:568 192.0 1.0 T -54.7 124.6 192.0 1.0 0.0 UNL
 7.290
 N
 O
GLN E:568 N:568 188.0 1.0 T -54.1 125.2 NA NA NA
2h88 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 GLN A:568 A:568 182.0 1.0 T -49.3 118.4 182.0 1.0 0.0 HOH
 4.244
 C
 O
GLN E:568 N:568 181.0 1.0 T -49.2 119.1 NA NA NA
2h89 1 Q9YHT1 91.79 0.0 X-RAY
 2006-06-20 GLN A:568 A:568 181.0 1.0 T -51.3 126.1 181.0 1.0 0.0 HOH
 2.515
 O
 O
2wqy 1 Q9YHT1 91.79 0.0 X-RAY
 2010-08-25 GLN A:568 A:568 179.0 0.994 T -50.2 114.9 179.0 0.994 0.0 UNL
HOH
 8.459
4.477
 N
C
 C2
O
GLN E:568 N:568 176.0 0.978 T -50.2 115.1 NA NA NA
6myo 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLN A:568 A:568 184.0 1.0 T -56.7 127.6 184.0 1.0 0.0
6myp 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLN A:568 A:568 179.0 0.994 T -64.4 112.0 179.0 0.994 0.0
6myq 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLN A:568 A:568 179.0 0.994 T -51.6 111.3 179.0 0.994 0.0 HOH
 2.640
 N
 O
6myr 1 F1NPJ4 91.79 0.0 X-RAY
 2019-10-16 GLN A:568 A:568 181.0 1.0 T -58.3 112.2 181.0 1.0 0.0
6mys 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLN A:568 A:568 178.0 0.989 T -59.3 103.1 178.0 0.989 0.0
6myt 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLN A:568 A:568 176.0 0.978 T -59.2 125.5 176.0 0.978 0.0
6myu 1 F1NPJ4 91.79 0.0 X-RAY
 2019-11-06 GLN A:568 A:568 180.0 1.0 T -50.1 111.3 180.0 1.0 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p31040-f1 1 P31040 100.0 0.0 GLN A:611 A:611 180.0 1.0 T -60.6 119.4