Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35861006 . G A CCDS3911.1:NM_002185.3:c.135caG>caA_NP_002176.2:p.45Q>Q Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 GLN B:46 B:45 35.0 0.194 E -138.2 109.6 35.0 0.194 0.0 HOH
 8.133
 HE22
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 GLN B:29 B:25 35.0 0.194 E -138.1 113.3 35.0 0.194 0.0 HOH
 3.965
 C
 O
GLN D:29 D:25 32.0 0.178 E -139.7 112.8 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 GLN B:29 B:25 38.0 0.211 E -133.9 103.4 38.0 0.211 0.0 HOH
 4.264
 NE2
 O
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 GLN A:29 A:25 36.0 0.2 E -123.4 123.9 36.0 0.2 0.0 SO4
HOH
 3.090
2.670
 NE2
OE1
 O2
O
GLN B:29 B:25 42.0 0.233 E -132.9 145.8 42.0 0.233 0.0 NGA
HOH
 5.487
2.691
 C
OE1
 O4
O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 GLN A:29 C:25 41.0 0.228 E -120.7 124.9 41.0 0.228 0.0
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 GLN G:29 G:25 39.0 0.217 E -92.8 121.9 NA NA NA
GLN I:29 I:25 41.0 0.228 E -91.9 121.3 NA NA NA
GLN J:29 J:25 55.0 0.306 E -94.7 117.7 NA NA NA
GLN K:29 K:25 56.0 0.311 E -90.2 118.3 56.0 0.311 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 GLN A:45 A:45 35.0 0.194 E -133.9 133.0