Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35861023 . C A CCDS3911.1:NM_002185.3:c.152tCg>tAg_NP_002176.2:p.51S>* Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 SER B:52 B:51 64.0 0.557 T -91.9 5.5 64.0 0.557 0.0
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 SER B:35 B:31 74.0 0.643 T -97.3 8.2 39.0 0.339 0.304 A:P13232:0.304
 HOH
 4.201
 OG
 O
SER D:35 D:31 67.0 0.583 T -96.8 8.4 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 SER B:35 B:31 66.0 0.574 T -115.2 9.8 48.0 0.417 0.157 A:P13232:0.157
 NAG
HOH
 7.673
7.854
 N
O
 O5
O
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 SER A:35 A:31 70.0 0.609 T -92.1 -2.1 70.0 0.609 0.0 SO4
HOH
 6.704
4.860
 C
N
 O4
O
SER B:35 B:31 63.0 0.548 T -86.0 1.8 63.0 0.548 0.0 SO4
HOH
 7.404
9.485
 O
C
 O2
O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 SER A:35 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 SER G:35 G:31 80.0 0.696 T -114.1 1.3 NA NA NA
SER I:35 I:31 56.0 0.487 T -109.9 3.0 NA NA NA
SER J:35 J:31 76.0 0.661 T -113.2 1.4 NA NA NA
SER K:35 K:31 72.0 0.626 T -114.9 3.1 72.0 0.626 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 SER A:51 A:51 64.0 0.557 T -89.0 10.2