Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35861049 . G A CCDS3911.1:NM_002185.3:c.178Gag>Aag_NP_002176.2:p.60E>K Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 GLU B:61 B:60 126.0 0.663 S -67.0 -33.6 126.0 0.663 0.0
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 GLU B:44 B:40 121.0 0.637 S -77.2 -28.3 121.0 0.637 0.0 HOH
 8.174
 OE1
 O
GLU D:44 D:40 124.0 0.653 S -74.1 -36.8 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 GLU B:44 B:40 115.0 0.605 S -59.2 -53.3 115.0 0.605 0.0 HOH
 4.304
 OE2
 O
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 GLU A:44 A:40 114.0 0.6 S -70.7 -24.2 114.0 0.6 0.0 HOH
 5.443
 OE1
 O
GLU B:44 B:40 112.0 0.589 S -67.8 -30.5 112.0 0.589 0.0 HOH
 3.511
 N
 O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 GLU A:44 C:40 61.0 NA -88.9 -27.7 61.0 NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 GLU G:44 G:40 125.0 0.658 S -64.4 -48.0 NA NA NA
GLU I:44 I:40 116.0 0.611 S -70.0 -51.8 NA NA NA
GLU J:44 J:40 69.0 NA S -68.9 -47.2 NA NA NA
GLU K:44 K:40 67.0 NA S -75.7 -47.3 67.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 GLU A:60 A:60 108.0 0.568 S -81.2 -27.5