Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35861076 . C A CCDS3911.1:NM_002185.3:c.205Ctg>Atg_NP_002176.2:p.69L>M Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 LEU B:70 B:69 23.0 0.135 -99.4 141.0 23.0 0.135 0.0
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 LEU B:53 B:49 6.0 0.035 E -81.7 143.8 6.0 0.035 0.0
LEU D:53 D:49 6.0 0.035 E -83.6 144.6 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 LEU B:53 B:49 9.0 0.053 E -74.2 156.1 9.0 0.053 0.0 NAG
NAG
HOH
 5.450
7.180
9.328
 N
N
CD1
 O6
C6
O
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 LEU A:53 A:49 7.0 0.041 E -103.9 133.8 7.0 0.041 0.0 HOH
 4.910
 O
 O
LEU B:53 B:49 11.0 0.065 -100.2 132.0 11.0 0.065 0.0 HOH
 4.852
 O
 O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 LEU A:53 C:49 19.0 0.112 E -89.6 140.3 19.0 0.112 0.0 NAG
 8.164
 CD2
 C1
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 LEU G:53 G:49 15.0 0.088 -109.2 147.9 NA NA NA
LEU I:53 I:49 39.0 0.229 -101.4 163.5 NA NA NA
LEU J:53 J:49 48.0 0.282 -136.4 146.2 NA NA NA
LEU K:53 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 LEU A:69 A:69 10.0 0.059 -92.5 126.8