Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35861085 . G A CCDS3911.1:NM_002185.3:c.214Gaa>Aaa_NP_002176.2:p.72E>K Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 GLU B:73 B:72 43.0 0.226 E -140.3 129.9 43.0 0.226 0.0 HOH
 9.614
 HG2
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 GLU B:56 B:52 34.0 0.179 E -144.1 144.3 34.0 0.179 0.0
GLU D:56 D:52 66.0 0.347 E -143.0 141.6 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 GLU B:56 B:52 42.0 0.221 E -143.1 159.9 42.0 0.221 0.0
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 GLU A:56 A:52 37.0 0.195 E -136.2 146.9 37.0 0.195 0.0 HOH
 2.692
 OE2
 O
GLU B:56 B:52 32.0 0.168 E -142.1 147.3 32.0 0.168 0.0 SO4
GOL
HOH
 7.649
8.328
2.487
 OE1
OE1
OE1
 O2
C3
O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 GLU A:56 C:52 24.0 0.126 E -148.9 140.4 19.0 0.1 0.026 B:None:0.026
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 GLU G:56 G:52 28.0 0.147 E -128.5 137.4 NA NA NA
GLU I:56 I:52 30.0 0.158 E -121.8 130.2 NA NA NA
GLU J:56 J:52 37.0 NA E -127.6 134.8 NA NA NA
GLU K:56 K:52 38.0 0.2 E -129.0 135.8 38.0 0.2 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 GLU A:72 A:72 36.0 0.189 E -127.7 136.5