Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35867421 . G A CCDS3911.1:NM_002185.3:c.235Gag>Aag_NP_002176.2:p.79E>K Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 GLU B:80 B:79 172.0 0.905 S 63.3 16.7 141.0 0.742 0.163 A:Q969D9:0.163
 HOH
 5.862
 H
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 GLU B:63 B:59 144.0 0.758 S -56.3 -36.7 82.0 0.432 0.326 A:P13232:0.326
 HOH
 4.823
 N
 O
GLU D:63 D:59 152.0 0.8 S -53.8 -36.6 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 GLU B:63 B:59 87.0 NA S -43.6 -57.5 62.0 NA NA A:P13232:NA
 HOH
 7.725
 CB
 O
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 GLU A:63 A:59 178.0 0.937 S 68.4 -19.4 125.0 0.658 0.279 B:P16871:0.279
 SO4
NGA
HOH
 6.962
9.731
4.510
 OE1
N
O
 O2
C8
O
GLU B:63 B:59 191.0 1.0 S 49.5 59.9 181.0 0.953 0.047 A:P16871:0.053
 SO4
SO4
GOL
 5.291
9.171
4.966
 O
O
N
 O1
O3
O2
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 GLU A:63 C:59 94.0 NA S -88.3 -42.2 57.0 NA NA C:None:NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 GLU G:63 G:59 63.0 NA S -82.0 83.1 NA NA NA
GLU I:63 I:59 97.0 NA S -44.6 -73.5 NA NA NA
GLU J:63 J:59 167.0 0.879 S -103.4 -61.5 NA NA NA
GLU K:63 K:59 107.0 NA S 76.4 -12.3 107.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 GLU A:79 A:79 167.0 0.879 S 61.6 -22.5