Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35867425 . T A CCDS3911.1:NM_002185.3:c.239gTa>gAa_NP_002176.2:p.80V>E Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 VAL B:81 B:80 51.0 0.329 -141.6 152.8 51.0 0.329 0.0 HOH
 2.758
 O
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 VAL B:64 B:60 42.0 0.271 S -109.3 178.2 42.0 0.271 0.0 HOH
 3.693
 O
 O
VAL D:64 D:60 40.0 0.258 S -112.5 175.0 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 VAL B:64 B:60 54.0 0.348 S -89.2 175.0 54.0 0.348 0.0 HOH
 8.476
 CG2
 O
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 VAL A:64 A:60 55.0 0.355 -128.2 158.8 44.0 0.284 0.071 B:P16871:0.071
 SO4
HOH
 8.460
2.796
 CG2
O
 O2
O
VAL B:64 B:60 57.0 0.368 -177.6 143.9 57.0 0.368 0.0 SO4
SO4
GOL
GOL
HOH
 3.050
8.384
3.743
7.506
8.448
 CG2
CG1
O
CG2
CG1
 O1
O2
O2
C3
O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 VAL A:64 C:60 94.0 0.606 -115.9 147.0 82.0 0.529 0.077 C:None:0.077
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 VAL G:64 G:60 123.0 0.794 -41.5 98.8 NA NA NA
VAL I:64 I:60 85.0 0.548 S -103.5 153.0 NA NA NA
VAL J:64 J:60 88.0 0.568 S -60.7 149.3 NA NA NA
VAL K:64 K:60 65.0 0.419 -131.8 152.4 65.0 0.419 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 VAL A:80 A:80 45.0 0.29 -120.4 152.5