Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr5 | 35867451 | . | C | A | CCDS3911.1:NM_002185.3:c.265Caa>Aaa_NP_002176.2:p.89Q>K | Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5j11 | 2 | D6RGV2 | 100.0 | 7e-163 |
X-RAY |
2017-04-05 | GLN | B:90 | B:89 | 168.0 | 0.933 | T | 49.5 | -123.1 | 168.0 | 0.933 | 0.0 | ||||||
3di2 | 2 | P16871 | 99.54 | 2e-162 |
X-RAY |
2009-01-27 | GLN | B:73 | B:69 | 181.0 | 1.0 | T | 90.2 | -109.6 | 181.0 | 1.0 | 0.0 | ||||||
GLN | D:73 | D:69 | 160.0 | 0.889 | T | 87.0 | -107.3 | NA | NA | NA | |||||||||||||
3di3 | 2 | P16871 | 99.54 | 2e-162 |
X-RAY |
2009-01-27 | GLN | B:73 | B:69 | 196.0 | 1.0 | T | 48.4 | -109.4 | 196.0 | 1.0 | 0.0 | ||||||
3up1 | 1 | P16871 | 99.54 | 2e-162 |
X-RAY |
2012-02-08 | GLN | A:73 | A:69 | 184.0 | 1.0 | T | 54.5 | 78.1 | 184.0 | 1.0 | 0.0 |
HOH |
6.489 |
O |
O |
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GLN | B:73 | B:69 | 155.0 | 0.861 | T | 53.6 | 44.7 | 155.0 | 0.861 | 0.0 |
HOH |
6.161 |
O |
O |
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6p50 | 1 | P16871 | 99.54 | 2e-162 |
X-RAY |
2019-09-04 | GLN | A:73 | C:69 | 198.0 | 1.0 | T | 58.4 | -98.2 | 198.0 | 1.0 | 0.0 | ||||||
6p67 | 3 | P16871 | 99.54 | 2e-162 |
X-RAY |
2019-09-04 | GLN | G:73 | G:69 | 89.0 | NA | T | 57.9 | -177.2 | NA | NA | NA | ||||||
GLN | I:73 | I:69 | 166.0 | 0.922 | T | 50.0 | 56.1 | NA | NA | NA | |||||||||||||
GLN | J:73 | J:69 | 91.0 | NA | T | 57.3 | -113.5 | NA | NA | NA | |||||||||||||
GLN | K:73 | K:69 | 90.0 | NA | T | 58.0 | -122.1 | 90.0 | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p16871-f1 | 1 | P16871 | 100.0 | 0.0 | GLN | A:89 | A:89 | 178.0 | 0.989 | T | 55.1 | -118.5 |