Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35867451 . C A CCDS3911.1:NM_002185.3:c.265Caa>Aaa_NP_002176.2:p.89Q>K Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
2017-04-05 GLN B:90 B:89 168.0 0.933 T 49.5 -123.1 168.0 0.933 0.0
3di2 2 P16871 99.54 2e-162 X-RAY
2009-01-27 GLN B:73 B:69 181.0 1.0 T 90.2 -109.6 181.0 1.0 0.0
GLN D:73 D:69 160.0 0.889 T 87.0 -107.3 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
2009-01-27 GLN B:73 B:69 196.0 1.0 T 48.4 -109.4 196.0 1.0 0.0
3up1 1 P16871 99.54 2e-162 X-RAY
2012-02-08 GLN A:73 A:69 184.0 1.0 T 54.5 78.1 184.0 1.0 0.0 HOH
6.489
O
O
GLN B:73 B:69 155.0 0.861 T 53.6 44.7 155.0 0.861 0.0 HOH
6.161
O
O
6p50 1 P16871 99.54 2e-162 X-RAY
2019-09-04 GLN A:73 C:69 198.0 1.0 T 58.4 -98.2 198.0 1.0 0.0
6p67 3 P16871 99.54 2e-162 X-RAY
2019-09-04 GLN G:73 G:69 89.0 NA T 57.9 -177.2 NA NA NA
GLN I:73 I:69 166.0 0.922 T 50.0 56.1 NA NA NA
GLN J:73 J:69 91.0 NA T 57.3 -113.5 NA NA NA
GLN K:73 K:69 90.0 NA T 58.0 -122.1 90.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 GLN A:89 A:89 178.0 0.989 T 55.1 -118.5