Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35867525 . A C CCDS3911.1:NM_002185.3:c.339gaA>gaC_NP_002176.2:p.113E>D Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 GLU B:114 B:113 84.0 NA T -96.1 -40.7 84.0 NA NA
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 GLU B:97 B:93 108.0 NA T -161.9 1.0 108.0 NA NA
GLU D:97 D:93 120.0 NA T -163.0 1.0 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 GLU B:97 B:93 149.0 0.784 T -138.9 -34.0 149.0 0.784 0.0
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 GLU A:97 A:93 179.0 0.942 T -106.3 5.9 179.0 0.942 0.0 HOH
 4.118
 O
 O
GLU B:97 B:93 167.0 0.879 T -90.4 -9.0 167.0 0.879 0.0 HOH
 7.622
 N
 O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 GLU A:97 C:93 184.0 0.968 T -129.4 5.1 173.0 0.911 0.057 B:None:0.058
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 GLU G:97 G:93 129.0 0.679 S -160.6 -172.7 NA NA NA
GLU I:97 I:93 146.0 0.768 T -143.9 46.3 NA NA NA
GLU J:97 J:93 116.0 NA S -84.6 -14.5 NA NA NA
GLU K:97 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 GLU A:113 A:113 189.0 0.995 T -90.1 -17.3