Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35867539 . G A CCDS3911.1:NM_002185.3:c.353tGc>tAc_NP_002176.2:p.118C>Y Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 CYS B:119 B:118 58.0 0.43 E -133.6 143.6 58.0 0.43 0.0
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 CYS B:102 B:98 46.0 0.341 E -149.6 154.7 46.0 0.341 0.0
CYS D:102 D:98 57.0 0.422 E -147.6 152.1 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 CYS B:102 B:98 67.0 0.496 -113.1 -160.3 67.0 0.496 0.0 HOH
 7.834
 N
 O
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 CYS A:102 A:98 47.0 0.348 E -133.7 161.1 47.0 0.348 0.0 HOH
 5.732
 O
 O
CYS B:102 B:98 58.0 0.43 E -132.5 161.3 58.0 0.43 0.0 HOH
 5.796
 O
 O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 CYS A:102 C:98 61.0 0.452 E -146.1 157.5 36.0 0.267 0.185 B:None:0.185
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 CYS G:102 G:98 53.0 0.393 E -124.4 153.4 NA NA NA
CYS I:102 I:98 69.0 0.511 E -122.6 149.8 NA NA NA
CYS J:102 J:98 64.0 0.474 E -122.5 153.5 NA NA NA
CYS K:102 K:98 77.0 0.57 E -122.7 150.2 77.0 0.57 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 CYS A:118 A:118 55.0 0.407 E -141.1 130.3