Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35867541 . A C CCDS3911.1:NM_002185.3:c.355Aaa>Caa_NP_002176.2:p.119K>Q Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 LYS B:120 B:119 83.0 0.415 E -135.6 123.9 83.0 0.415 0.0
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 LYS B:103 B:99 87.0 0.435 E -134.7 150.5 87.0 0.435 0.0
LYS D:103 D:99 75.0 0.375 E -129.6 149.2 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 LYS B:103 B:99 92.0 0.46 170.2 116.9 92.0 0.46 0.0 HOH
 8.896
 NZ
 O
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 LYS A:103 A:99 90.0 0.45 E -137.0 132.8 90.0 0.45 0.0 HOH
 3.308
 CD
 O
LYS B:103 B:99 83.0 0.415 E -149.3 126.3 83.0 0.415 0.0 HOH
 3.289
 CE
 O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 LYS A:103 C:99 119.0 0.595 E -151.2 158.5 108.0 0.54 0.055 B:None:0.055
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 LYS G:103 G:99 25.0 NA E -143.5 125.1 NA NA NA
LYS I:103 I:99 63.0 0.315 E -145.2 125.2 NA NA NA
LYS J:103 J:99 32.0 NA E -143.0 127.1 NA NA NA
LYS K:103 K:99 36.0 NA E -146.4 126.2 36.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 LYS A:119 A:119 70.0 0.35 E -108.8 130.8