Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35867562 . A C CCDS3911.1:NM_002185.3:c.376Ata>Cta_NP_002176.2:p.126I>L Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 ILE B:127 B:126 13.0 0.074 S -122.5 23.5 13.0 0.074 0.0 HOH
 8.103
 HD11
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ILE B:110 B:106 15.0 0.086 S -123.4 41.0 15.0 0.086 0.0 HOH
 6.704
 O
 O
ILE D:110 D:106 19.0 0.109 S -124.2 38.2 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ILE B:110 B:106 16.0 0.091 S -113.5 37.3 16.0 0.091 0.0 HOH
 8.396
 N
 O
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 ILE A:110 A:106 17.0 0.097 S -133.6 33.7 17.0 0.097 0.0 HOH
 4.053
 CG2
 O
ILE B:110 B:106 17.0 0.097 S -126.4 29.7 17.0 0.097 0.0 NGA
HOH
 8.995
3.779
 C
CG2
 O3
O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 ILE A:110 C:106 28.0 0.16 -92.9 87.5 28.0 0.16 0.0
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 ILE G:110 G:106 16.0 0.091 S -137.4 37.4 NA NA NA
ILE I:110 I:106 23.0 0.131 S -137.0 33.9 NA NA NA
ILE J:110 J:106 41.0 0.234 S -136.7 38.9 NA NA NA
ILE K:110 K:106 19.0 NA S -136.9 36.8 19.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 ILE A:126 A:126 16.0 0.091 S -121.1 25.5