Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35867565 . G A CCDS3911.1:NM_002185.3:c.379Gtt>Att_NP_002176.2:p.127V>I Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 VAL B:128 B:127 1.0 0.006 B -66.2 133.1 1.0 0.006 0.0 HOH
 8.534
 HG21
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 VAL B:111 B:107 0.0 0.0 B -80.3 141.8 0.0 0.0 0.0 HOH
 6.085
 CG1
 O
VAL D:111 D:107 1.0 0.006 B -79.8 140.3 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 VAL B:111 B:107 1.0 0.006 B -80.6 121.4 1.0 0.006 0.0 HOH
 7.216
 O
 O
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 VAL A:111 A:107 0.0 0.0 B -75.6 126.0 0.0 0.0 0.0 SO4
HOH
 9.340
3.684
 C
CG1
 O2
O
VAL B:111 B:107 11.0 0.071 B -73.9 133.0 11.0 0.071 0.0 NGA
HOH
 4.038
3.732
 CG1
CG1
 O3
O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 VAL A:111 C:107 84.0 0.542 B -129.2 126.9 84.0 0.542 0.0
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 VAL G:111 G:107 1.0 0.006 B -83.3 135.1 NA NA NA
VAL I:111 I:107 1.0 0.006 B -85.8 134.5 NA NA NA
VAL J:111 J:107 3.0 0.019 B -82.1 136.8 NA NA NA
VAL K:111 K:107 0.0 0.0 B -84.8 134.9 0.0 0.0 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 VAL A:127 A:127 1.0 0.006 B -70.8 126.9