Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35871197 . G A CCDS3911.1:NM_002185.3:c.419cGg>cAg_NP_002176.2:p.140R>Q Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 ARG B:141 B:140 122.0 0.542 E -105.3 106.7 51.0 0.227 0.315 C:Q9HC73:0.316
 HOH
 6.306
 HH12
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ARG B:124 B:120 128.0 0.569 E -95.6 110.0 128.0 0.569 0.0
ARG D:124 D:120 114.0 0.507 E -100.4 110.5 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ARG B:124 B:120 169.0 0.751 E -112.1 110.2 169.0 0.751 0.0 HOH
 9.315
 N
 O
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 ARG A:124 A:120 106.0 0.471 E -103.1 113.8 106.0 0.471 0.0 GOL
HOH
 3.736
7.554
 NH1
O
 O1
O
ARG B:124 B:120 106.0 0.471 E -112.5 108.8 106.0 0.471 0.0 HOH
 8.092
 CD
 O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 ARG A:124 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 ARG G:124 G:120 114.0 0.507 E -102.1 106.5 NA NA NA
ARG I:124 I:120 107.0 0.476 E -102.3 105.6 NA NA NA
ARG J:124 J:120 115.0 0.511 E -102.0 106.6 NA NA NA
ARG K:124 K:120 123.0 0.547 E -101.9 107.5 52.0 0.231 0.316 B:None:0.316

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 ARG A:140 A:140 116.0 0.516 E -116.3 100.5