Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35871205 . G A CCDS3911.1:NM_002185.3:c.427Gcc>Acc_NP_002176.2:p.143A>T Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 ALA B:144 B:143 53.0 0.461 T -67.3 -27.2 3.0 0.026 0.435 C:Q9HC73:0.435
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ALA B:127 B:123 54.0 0.47 T -72.1 2.6 54.0 0.47 0.0
ALA D:127 D:123 50.0 0.435 T -70.3 1.9 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ALA B:127 B:123 66.0 0.574 T -94.1 -0.8 66.0 0.574 0.0
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 ALA A:127 A:123 52.0 0.452 T -89.4 -5.5 52.0 0.452 0.0 GOL
HOH
 8.228
5.396
 CB
O
 O1
O
ALA B:127 B:123 44.0 0.383 T -89.0 -7.5 44.0 0.383 0.0 HOH
 9.963
 O
 O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 ALA A:127 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 ALA G:127 G:123 55.0 0.478 T -88.2 -7.4 NA NA NA
ALA I:127 I:123 56.0 0.487 T -88.3 -8.2 NA NA NA
ALA J:127 J:123 54.0 0.47 T -87.9 -7.6 NA NA NA
ALA K:127 K:123 55.0 0.478 T -88.7 -8.2 55.0 0.478 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 ALA A:143 A:143 40.0 0.348 G -131.9 -4.5