Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35871209 . A C CCDS3911.1:NM_002185.3:c.431aAt>aCt_NP_002176.2:p.144N>T Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 ASN B:145 B:144 78.0 0.487 T 60.6 50.3 77.0 0.481 0.006 C:Q9HC73:0.006
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ASN B:128 B:124 86.0 0.537 T 42.0 52.6 86.0 0.537 0.0
ASN D:128 D:124 98.0 0.613 T 45.4 50.7 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ASN B:128 B:124 83.0 0.519 T 53.6 57.3 83.0 0.519 0.0
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 ASN A:128 A:124 85.0 0.531 T 49.9 46.1 85.0 0.531 0.0 HOH
 3.267
 O
 O
ASN B:128 B:124 48.0 0.3 T 50.6 45.2 48.0 0.3 0.0 HOH
 6.934
 ND2
 O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 ASN A:128 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 ASN G:128 G:124 82.0 0.512 T 55.5 58.4 NA NA NA
ASN I:128 I:124 81.0 0.506 T 55.0 59.4 NA NA NA
ASN J:128 J:124 79.0 0.494 T 55.3 59.9 NA NA NA
ASN K:128 K:124 77.0 0.481 T 55.1 60.8 77.0 0.481 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 ASN A:144 A:144 92.0 0.575 T 45.9 44.6