Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35871280 . G A CCDS3911.1:NM_002185.3:c.502Gct>Act_NP_002176.2:p.168A>T Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 ALA B:169 B:168 0.0 0.0 E -118.9 131.1 0.0 0.0 0.0 HOH
 6.445
 HB2
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ALA B:152 B:148 0.0 0.0 E -120.2 138.9 0.0 0.0 0.0 HOH
 9.632
 CB
 O
ALA D:152 D:148 0.0 0.0 E -119.6 141.3 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ALA B:152 B:148 0.0 0.0 E -124.6 142.3 0.0 0.0 0.0
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 ALA A:152 A:148 0.0 0.0 E -118.4 135.4 0.0 0.0 0.0 HOH
 8.015
 CB
 O
ALA B:152 B:148 0.0 0.0 E -115.9 135.3 0.0 0.0 0.0 HOH
 8.048
 CA
 O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 ALA A:152 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 ALA G:152 G:148 0.0 0.0 E -113.1 129.6 NA NA NA
ALA I:152 I:148 0.0 0.0 E -113.6 129.3 NA NA NA
ALA J:152 J:148 0.0 0.0 E -113.2 128.8 NA NA NA
ALA K:152 K:148 1.0 0.009 E -113.2 128.4 1.0 0.009 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 ALA A:168 A:168 0.0 0.0 E -104.7 128.3