Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35871287 . G A CCDS3911.1:NM_002185.3:c.509cGc>cAc_NP_002176.2:p.170R>H Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 ARG B:171 B:170 45.0 0.2 E -163.5 174.0 45.0 0.2 0.0 HOH
 5.922
 O
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ARG B:154 B:150 42.0 0.187 E -154.5 178.6 42.0 0.187 0.0
ARG D:154 D:150 45.0 0.2 E -154.9 179.9 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ARG B:154 B:150 34.0 0.151 E -122.5 167.4 34.0 0.151 0.0
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 ARG A:154 A:150 55.0 0.244 E -154.8 157.6 55.0 0.244 0.0 HOH
 7.523
 CB
 O
ARG B:154 B:150 62.0 0.276 E -163.0 161.0 62.0 0.276 0.0 GOL
HOH
 9.884
3.607
 NH2
NH1
 O3
O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 ARG A:154 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 ARG G:154 G:150 49.0 0.218 E -136.6 158.2 NA NA NA
ARG I:154 I:150 60.0 0.267 E -133.6 155.5 NA NA NA
ARG J:154 J:150 6.0 NA E -138.0 164.2 NA NA NA
ARG K:154 K:150 66.0 0.293 E -137.8 160.3 66.0 0.293 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 ARG A:170 A:170 44.0 0.196 E -153.9 167.1