Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35871312 . G A CCDS3911.1:NM_002185.3:c.534tgG>tgA_NP_002176.2:p.178W>* Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 TRP B:179 B:178 61.0 0.239 -83.4 139.9 61.0 0.239 0.0 HOH
 8.540
 HB3
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 TRP B:162 B:158 57.0 0.224 -87.6 153.5 57.0 0.224 0.0
TRP D:162 D:158 58.0 0.227 -88.2 151.3 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 TRP B:162 B:158 57.0 0.224 -108.0 158.7 57.0 0.224 0.0
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 TRP A:162 A:158 63.0 0.247 -103.3 142.6 63.0 0.247 0.0 HOH
 3.313
 N
 O
TRP B:162 B:158 40.0 0.157 -88.4 155.1 40.0 0.157 0.0 GOL
HOH
 8.662
3.042
 CH2
NE1
 O3
O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 TRP A:162 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 TRP G:162 G:158 56.0 0.22 -133.4 135.0 NA NA NA
TRP I:162 I:158 54.0 0.212 -125.3 133.6 NA NA NA
TRP J:162 J:158 95.0 0.373 -81.1 137.8 NA NA NA
TRP K:162 K:158 30.0 0.118 -126.7 135.9 30.0 0.118 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 TRP A:178 A:178 63.0 0.247 -76.0 133.3