Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35871314 . C A CCDS3911.1:NM_002185.3:c.536aCg>aAg_NP_002176.2:p.179T>K Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 THR B:180 B:179 62.0 0.443 E -109.2 119.6 62.0 0.443 0.0 HOH
 7.703
 C
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 THR B:163 B:159 67.0 0.479 E -104.6 116.3 67.0 0.479 0.0
THR D:163 D:159 66.0 0.471 E -103.1 114.1 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 THR B:163 B:159 72.0 0.514 E -130.3 118.9 72.0 0.514 0.0
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 THR A:163 A:159 72.0 0.514 E -97.4 135.8 72.0 0.514 0.0 HOH
 5.825
 N
 O
THR B:163 B:159 56.0 0.4 E -100.8 125.4 56.0 0.4 0.0 HOH
 4.043
 CA
 O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 THR A:163 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 THR G:163 G:159 74.0 0.529 E -92.4 121.7 NA NA NA
THR I:163 I:159 71.0 0.507 E -92.1 121.4 NA NA NA
THR J:163 J:159 67.0 0.479 E -91.2 122.0 NA NA NA
THR K:163 K:159 70.0 0.5 E -91.5 120.7 70.0 0.5 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 THR A:179 A:179 61.0 0.436 E -100.6 118.6